Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 AP005117.1-202ENST00000581724 1908 ntBASIC18.57■□□□□ 0.56
ERCC4Q92889 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.57■□□□□ 0.56
ERCC4Q92889 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ERCC4Q92889 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.57■□□□□ 0.56
ERCC4Q92889 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ERCC4Q92889 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.57■□□□□ 0.56
ERCC4Q92889 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ERCC4Q92889 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC4Q92889 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC4Q92889 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ERCC4Q92889 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC4Q92889 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC4Q92889 IGHV3-65-201ENST00000523210 341 ntBASIC18.56■□□□□ 0.56
ERCC4Q92889 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC4Q92889 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC4Q92889 AC008667.4-201ENST00000607370 168 ntBASIC18.56■□□□□ 0.56
ERCC4Q92889 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC4Q92889 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ERCC4Q92889 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC4Q92889 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
ERCC4Q92889 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC4Q92889 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.56■□□□□ 0.56
ERCC4Q92889 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.56■□□□□ 0.56
ERCC4Q92889 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
ERCC4Q92889 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.56■□□□□ 0.56
ERCC4Q92889 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.56■□□□□ 0.56
ERCC4Q92889 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ERCC4Q92889 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ERCC4Q92889 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
ERCC4Q92889 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC4Q92889 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.55■□□□□ 0.56
ERCC4Q92889 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC4Q92889 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC4Q92889 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
ERCC4Q92889 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.55■□□□□ 0.56
ERCC4Q92889 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
ERCC4Q92889 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.55■□□□□ 0.56
ERCC4Q92889 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC4Q92889 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
ERCC4Q92889 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC4Q92889 AC004790.2-201ENST00000623588 572 ntBASIC18.55■□□□□ 0.56
ERCC4Q92889 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.55■□□□□ 0.56
ERCC4Q92889 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 AC013268.4-201ENST00000637413 2228 ntBASIC18.55■□□□□ 0.56
ERCC4Q92889 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ERCC4Q92889 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms