Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 CEND1P1-201ENST00000451006 455 ntBASIC14.31□□□□□ -0.12
CPEB3Q8NE35 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 AC243562.1-201ENST00000560672 389 ntBASIC14.31□□□□□ -0.12
CPEB3Q8NE35 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.31□□□□□ -0.12
CPEB3Q8NE35 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 CYP2T1P-202ENST00000641596 2535 ntBASIC14.3□□□□□ -0.12
CPEB3Q8NE35 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 YBX1P5-201ENST00000509441 847 ntBASIC14.3□□□□□ -0.12
CPEB3Q8NE35 KRT8P48-201ENST00000515599 1220 ntBASIC14.3□□□□□ -0.12
CPEB3Q8NE35 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 MIR4469-201ENST00000583919 79 ntBASIC14.3□□□□□ -0.12
CPEB3Q8NE35 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 AC026120.1-201ENST00000611536 926 ntBASIC14.3□□□□□ -0.12
CPEB3Q8NE35 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CPEB3Q8NE35 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CPEB3Q8NE35 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms