Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 AC104982.3-201ENST00000581995 514 ntBASIC13.49□□□□□ -0.25
CSMD2Q7Z408 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSMD2Q7Z408 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AC069218.1-201ENST00000435269 762 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 RHOXF1P1-202ENST00000635473 501 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AL603756.1-201ENST00000606511 2163 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AC120498.9-201ENST00000339021 3867 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 MAGEA5-201ENST00000446757 942 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AL451050.2-201ENST00000606967 682 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AC079336.7-201ENST00000623428 1078 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 U82695.1-201ENST00000635752 1889 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AC006001.1-201ENST00000325130 474 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AC245884.6-201ENST00000515672 1067 ntBASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSMD2Q7Z408 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 MIR3907-201ENST00000579424 151 ntBASIC13.47□□□□□ -0.25
CSMD2Q7Z408 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 AL139010.1-201ENST00000454878 894 ntBASIC13.47□□□□□ -0.25
CSMD2Q7Z408 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 AC104596.2-201ENST00000512793 793 ntBASIC13.47□□□□□ -0.25
CSMD2Q7Z408 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 AF254983.2-201ENST00000612331 135 ntBASIC13.47□□□□□ -0.25
CSMD2Q7Z408 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSMD2Q7Z408 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms