Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 PTCHD3P3-201ENST00000403073 906 ntBASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 HCG4-201ENST00000418983 998 ntBASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 AC132008.2-207ENST00000454517 770 ntBASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 SLC25A6P2-201ENST00000497974 877 ntBASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 AC106795.1-205ENST00000512851 1056 ntBASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 PNN-202ENST00000553331 656 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 AC139887.3-201ENST00000568585 713 ntBASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 TMBIM7P-203ENST00000641617 1718 ntBASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 AC006486.2-201ENST00000624246 2199 ntBASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC00242Q5T6M2 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 KRT16P4-201ENST00000453883 522 ntBASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 AC005412.3-201ENST00000580309 715 ntBASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 MIR3180-1-201ENST00000580374 94 ntBASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 MIR3180-3-201ENST00000584616 94 ntBASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms