Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.92■□□□□ 0.46
UBXN1Q04323 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
UBXN1Q04323 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.92■□□□□ 0.46
UBXN1Q04323 AC021097.1-201ENST00000607902 574 ntBASIC17.92■□□□□ 0.46
UBXN1Q04323 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 PKD1P5-201ENST00000532415 10291 ntBASIC17.92■□□□□ 0.46
UBXN1Q04323 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UBXN1Q04323 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
UBXN1Q04323 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
UBXN1Q04323 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.92■□□□□ 0.46
UBXN1Q04323 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.92■□□□□ 0.46
UBXN1Q04323 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
UBXN1Q04323 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
UBXN1Q04323 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
UBXN1Q04323 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.91■□□□□ 0.46
UBXN1Q04323 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.91■□□□□ 0.46
UBXN1Q04323 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 EMBP1-201ENST00000458200 901 ntBASIC17.91■□□□□ 0.46
UBXN1Q04323 AF186996.4-201ENST00000467186 377 ntBASIC17.91■□□□□ 0.46
UBXN1Q04323 CXCL1P1-201ENST00000502804 216 ntBASIC17.91■□□□□ 0.46
UBXN1Q04323 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.91■□□□□ 0.46
UBXN1Q04323 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.91■□□□□ 0.46
UBXN1Q04323 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.91■□□□□ 0.46
UBXN1Q04323 AL031055.1-201ENST00000606362 631 ntBASIC17.91■□□□□ 0.46
UBXN1Q04323 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
UBXN1Q04323 AC073347.1-201ENST00000421633 2643 ntBASIC17.91■□□□□ 0.46
UBXN1Q04323 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.91■□□□□ 0.46
UBXN1Q04323 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.91■□□□□ 0.46
UBXN1Q04323 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
UBXN1Q04323 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.9■□□□□ 0.46
UBXN1Q04323 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBXN1Q04323 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBXN1Q04323 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBXN1Q04323 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.9■□□□□ 0.46
UBXN1Q04323 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
UBXN1Q04323 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.9■□□□□ 0.46
UBXN1Q04323 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBXN1Q04323 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBXN1Q04323 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBXN1Q04323 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
UBXN1Q04323 RPS2P28-201ENST00000314255 741 ntBASIC17.9■□□□□ 0.46
UBXN1Q04323 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
UBXN1Q04323 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
UBXN1Q04323 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.9■□□□□ 0.46
UBXN1Q04323 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.9■□□□□ 0.46
UBXN1Q04323 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.9■□□□□ 0.46
UBXN1Q04323 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.9■□□□□ 0.46
UBXN1Q04323 AL121912.1-201ENST00000603683 238 ntBASIC17.9■□□□□ 0.46
UBXN1Q04323 AC148477.8-201ENST00000624298 468 ntBASIC17.9■□□□□ 0.46
UBXN1Q04323 AC117500.6-201ENST00000624871 588 ntBASIC17.9■□□□□ 0.46
UBXN1Q04323 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.9■□□□□ 0.46
UBXN1Q04323 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBXN1Q04323 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
UBXN1Q04323 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC17.9■□□□□ 0.46
UBXN1Q04323 NORAD-201ENST00000565493 5339 ntBASIC17.9■□□□□ 0.46
UBXN1Q04323 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
UBXN1Q04323 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
UBXN1Q04323 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
UBXN1Q04323 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBXN1Q04323 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
UBXN1Q04323 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
UBXN1Q04323 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.89■□□□□ 0.45
UBXN1Q04323 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBXN1Q04323 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.89■□□□□ 0.45
UBXN1Q04323 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBXN1Q04323 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC17.89■□□□□ 0.45
UBXN1Q04323 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBXN1Q04323 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBXN1Q04323 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBXN1Q04323 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
UBXN1Q04323 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
UBXN1Q04323 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
UBXN1Q04323 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.89■□□□□ 0.45
UBXN1Q04323 KRT18P67-201ENST00000432816 1264 ntBASIC17.89■□□□□ 0.45
UBXN1Q04323 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.89■□□□□ 0.45
UBXN1Q04323 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms