Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
SPCS3P61009 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.38□□□□□ -0.27
SPCS3P61009 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.38□□□□□ -0.27
SPCS3P61009 PAWRP1-201ENST00000451083 565 ntBASIC13.38□□□□□ -0.27
SPCS3P61009 KRT16P4-201ENST00000453883 522 ntBASIC13.38□□□□□ -0.27
SPCS3P61009 BX005266.1-201ENST00000473402 457 ntBASIC13.38□□□□□ -0.27
SPCS3P61009 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.38□□□□□ -0.27
SPCS3P61009 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SPCS3P61009 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 AC064862.7-201ENST00000604520 867 ntBASIC13.38□□□□□ -0.27
SPCS3P61009 AL139424.1-201ENST00000607572 797 ntBASIC13.38□□□□□ -0.27
SPCS3P61009 AL589182.2-201ENST00000619332 1049 ntBASIC13.38□□□□□ -0.27
SPCS3P61009 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.38□□□□□ -0.27
SPCS3P61009 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.38□□□□□ -0.27
SPCS3P61009 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SPCS3P61009 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.38□□□□□ -0.27
SPCS3P61009 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.38□□□□□ -0.27
SPCS3P61009 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.38□□□□□ -0.27
SPCS3P61009 PCGF3-213ENST00000620529 1899 ntBASIC13.38□□□□□ -0.27
SPCS3P61009 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPCS3P61009 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 SLC9A3P3-201ENST00000457608 2229 ntBASIC13.37□□□□□ -0.27
SPCS3P61009 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
SPCS3P61009 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC13.37□□□□□ -0.27
SPCS3P61009 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.37□□□□□ -0.27
SPCS3P61009 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.37□□□□□ -0.27
SPCS3P61009 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.37□□□□□ -0.27
SPCS3P61009 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
SPCS3P61009 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.37□□□□□ -0.27
SPCS3P61009 AF228730.7-201ENST00000641842 219 ntBASIC13.37□□□□□ -0.27
SPCS3P61009 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 AC126177.1-201ENST00000547829 2218 ntBASIC13.37□□□□□ -0.27
SPCS3P61009 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.37□□□□□ -0.27
SPCS3P61009 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.37□□□□□ -0.27
SPCS3P61009 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPCS3P61009 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.37□□□□□ -0.27
SPCS3P61009 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.37□□□□□ -0.27
SPCS3P61009 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 AC131009.4-201ENST00000624048 1740 ntBASIC13.36□□□□□ -0.27
SPCS3P61009 AC015656.1-201ENST00000624209 3578 ntBASIC13.36□□□□□ -0.27
SPCS3P61009 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SPCS3P61009 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPCS3P61009 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.36□□□□□ -0.27
SPCS3P61009 AC005252.3-201ENST00000623855 2258 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms