Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB38P57729 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAB38P57729 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB38P57729 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB38P57729 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
RAB38P57729 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 MIR648-201ENST00000385046 94 ntBASIC15.31■□□□□ 0.04
RAB38P57729 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.31■□□□□ 0.04
RAB38P57729 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 AL353705.2-201ENST00000428243 662 ntBASIC15.31■□□□□ 0.04
RAB38P57729 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB38P57729 METTL21AP1-201ENST00000438852 635 ntBASIC15.31■□□□□ 0.04
RAB38P57729 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB38P57729 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 MIR6080-201ENST00000617359 66 ntBASIC15.31■□□□□ 0.04
RAB38P57729 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB38P57729 KRT18P28-201ENST00000453838 1332 ntBASIC15.31■□□□□ 0.04
RAB38P57729 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB38P57729 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
RAB38P57729 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB38P57729 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB38P57729 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB38P57729 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB38P57729 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB38P57729 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB38P57729 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB38P57729 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB38P57729 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RAB38P57729 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB38P57729 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.3■□□□□ 0.04
RAB38P57729 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB38P57729 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB38P57729 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 AC069262.1-201ENST00000539058 672 ntBASIC15.3■□□□□ 0.04
RAB38P57729 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.3■□□□□ 0.04
RAB38P57729 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAB38P57729 AC025678.2-201ENST00000562061 970 ntBASIC15.3■□□□□ 0.04
RAB38P57729 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.3■□□□□ 0.04
RAB38P57729 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB38P57729 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB38P57729 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB38P57729 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB38P57729 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB38P57729 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
RAB38P57729 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB38P57729 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.29■□□□□ 0.04
RAB38P57729 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RAB38P57729 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms