Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP24386 AC126177.1-201ENST00000547829 2218 ntBASIC15.32■□□□□ 0.04
CHMP24386 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP24386 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CHMP24386 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP24386 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CHMP24386 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 YBX2P1-201ENST00000394192 760 ntBASIC15.32■□□□□ 0.04
CHMP24386 AC023274.1-201ENST00000418278 595 ntBASIC15.32■□□□□ 0.04
CHMP24386 UPF3AP3-201ENST00000420996 769 ntBASIC15.32■□□□□ 0.04
CHMP24386 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP24386 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.32■□□□□ 0.04
CHMP24386 AC107918.2-201ENST00000530817 355 ntBASIC15.32■□□□□ 0.04
CHMP24386 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP24386 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP24386 AC018845.2-201ENST00000568326 409 ntBASIC15.32■□□□□ 0.04
CHMP24386 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 ACTL9-202ENST00000612068 1252 ntBASIC15.32■□□□□ 0.04
CHMP24386 AC139530.3-201ENST00000620344 690 ntBASIC15.32■□□□□ 0.04
CHMP24386 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP24386 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP24386 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CHMP24386 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CHMP24386 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CHMP24386 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP24386 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
CHMP24386 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.32■□□□□ 0.04
CHMP24386 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.32■□□□□ 0.04
CHMP24386 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.32■□□□□ 0.04
CHMP24386 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.32■□□□□ 0.04
CHMP24386 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHMP24386 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHMP24386 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CHMP24386 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CHMP24386 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.31■□□□□ 0.04
CHMP24386 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP24386 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
CHMP24386 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP24386 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CHMP24386 MCCD1P2-201ENST00000423228 335 ntBASIC15.31■□□□□ 0.04
CHMP24386 AL513480.1-201ENST00000451731 511 ntBASIC15.31■□□□□ 0.04
CHMP24386 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CHMP24386 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.31■□□□□ 0.04
CHMP24386 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.31■□□□□ 0.04
CHMP24386 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 AC005412.3-201ENST00000580309 715 ntBASIC15.31■□□□□ 0.04
CHMP24386 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.31■□□□□ 0.04
CHMP24386 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.31■□□□□ 0.04
CHMP24386 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.31■□□□□ 0.04
CHMP24386 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 BCAR1-209ENST00000546196 1340 ntBASIC15.31■□□□□ 0.04
CHMP24386 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
CHMP24386 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CHMP24386 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 GGT4P-201ENST00000623672 1708 ntBASIC15.31■□□□□ 0.04
CHMP24386 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 AL671710.1-201ENST00000610245 2349 ntBASIC15.31■□□□□ 0.04
CHMP24386 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHMP24386 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHMP24386 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHMP24386 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CHMP24386 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHMP24386 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CHMP24386 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.3■□□□□ 0.04
CHMP24386 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHMP24386 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms