Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 AL603756.1-201ENST00000606511 2163 ntBASIC21.46■■□□□ 1.03
CSB-PGBD3P0DP91 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 PDIA3P1-201ENST00000471856 1510 ntBASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 SPIB-207ENST00000597855 564 ntTSL 4 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 GPR182-203ENST00000622922 591 ntBASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 CU634019.7-201ENST00000624153 1185 ntBASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 FP236241.2-201ENST00000624906 1185 ntBASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 KRT8P22-201ENST00000562317 1415 ntBASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
CSB-PGBD3P0DP91 AC141586.5-201ENST00000624546 2050 ntBASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 ACTBP11-201ENST00000436287 1126 ntBASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 KLF2P4-201ENST00000451959 1225 ntBASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 HNRNPA1P13-201ENST00000510646 963 ntBASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 AL365330.1-201ENST00000607459 531 ntBASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 AC006538.1-201ENST00000567905 1585 ntBASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CSB-PGBD3P0DP91 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 AC133539.2-201ENST00000604757 467 ntBASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.43■■□□□ 1.02
CSB-PGBD3P0DP91 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms