Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.76■□□□□ 0.59
COL2A1P02458 AC005052.1-201ENST00000625181 2492 ntBASIC18.76■□□□□ 0.59
COL2A1P02458 AC106886.4-201ENST00000623557 2502 ntBASIC18.76■□□□□ 0.59
COL2A1P02458 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COL2A1P02458 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COL2A1P02458 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 AC006449.6-201ENST00000612330 2296 ntBASIC18.75■□□□□ 0.59
COL2A1P02458 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.75■□□□□ 0.59
COL2A1P02458 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.75■□□□□ 0.59
COL2A1P02458 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COL2A1P02458 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.75■□□□□ 0.59
COL2A1P02458 RPS2P32-201ENST00000439199 892 ntBASIC18.75■□□□□ 0.59
COL2A1P02458 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 RPL13AP25-201ENST00000484130 612 ntBASIC18.75■□□□□ 0.59
COL2A1P02458 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.75■□□□□ 0.59
COL2A1P02458 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.75■□□□□ 0.59
COL2A1P02458 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.75■□□□□ 0.59
COL2A1P02458 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
COL2A1P02458 AC084346.2-201ENST00000607097 949 ntBASIC18.75■□□□□ 0.59
COL2A1P02458 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.75■□□□□ 0.59
COL2A1P02458 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.75■□□□□ 0.59
COL2A1P02458 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.75■□□□□ 0.59
COL2A1P02458 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL2A1P02458 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.75■□□□□ 0.59
COL2A1P02458 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COL2A1P02458 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.74■□□□□ 0.59
COL2A1P02458 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL2A1P02458 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.74■□□□□ 0.59
COL2A1P02458 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL2A1P02458 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.74■□□□□ 0.59
COL2A1P02458 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.74■□□□□ 0.59
COL2A1P02458 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.74■□□□□ 0.59
COL2A1P02458 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL2A1P02458 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.74■□□□□ 0.59
COL2A1P02458 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.74■□□□□ 0.59
COL2A1P02458 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL2A1P02458 AP005482.1-201ENST00000563722 1273 ntBASIC18.74■□□□□ 0.59
COL2A1P02458 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.74■□□□□ 0.59
COL2A1P02458 AC120045.2-201ENST00000567334 178 ntBASIC18.74■□□□□ 0.59
COL2A1P02458 AC133539.2-201ENST00000604757 467 ntBASIC18.74■□□□□ 0.59
COL2A1P02458 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.74■□□□□ 0.59
COL2A1P02458 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL2A1P02458 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL2A1P02458 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
COL2A1P02458 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL2A1P02458 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.74■□□□□ 0.59
COL2A1P02458 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL2A1P02458 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.74■□□□□ 0.59
COL2A1P02458 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL2A1P02458 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.73■□□□□ 0.59
COL2A1P02458 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.73■□□□□ 0.59
COL2A1P02458 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL2A1P02458 KRT8P22-201ENST00000562317 1415 ntBASIC18.73■□□□□ 0.59
COL2A1P02458 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.73■□□□□ 0.59
COL2A1P02458 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 ANKRD19P-201ENST00000338192 862 ntBASIC18.73■□□□□ 0.59
COL2A1P02458 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.73■□□□□ 0.59
COL2A1P02458 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.73■□□□□ 0.59
COL2A1P02458 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL2A1P02458 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.73■□□□□ 0.59
COL2A1P02458 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.73■□□□□ 0.59
COL2A1P02458 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.73■□□□□ 0.59
COL2A1P02458 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL2A1P02458 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.73■□□□□ 0.59
COL2A1P02458 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.73■□□□□ 0.59
COL2A1P02458 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.73■□□□□ 0.59
COL2A1P02458 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.73■□□□□ 0.59
COL2A1P02458 CU634019.7-201ENST00000624153 1185 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms