Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.26■□□□□ 0.51
GGPS1O95749 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
GGPS1O95749 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.26■□□□□ 0.51
GGPS1O95749 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.26■□□□□ 0.51
GGPS1O95749 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.26■□□□□ 0.51
GGPS1O95749 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.26■□□□□ 0.51
GGPS1O95749 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.26■□□□□ 0.51
GGPS1O95749 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
GGPS1O95749 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.26■□□□□ 0.51
GGPS1O95749 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.26■□□□□ 0.51
GGPS1O95749 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
GGPS1O95749 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
GGPS1O95749 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
GGPS1O95749 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.25■□□□□ 0.51
GGPS1O95749 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.25■□□□□ 0.51
GGPS1O95749 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
GGPS1O95749 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.25■□□□□ 0.51
GGPS1O95749 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.25■□□□□ 0.51
GGPS1O95749 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.25■□□□□ 0.51
GGPS1O95749 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.25■□□□□ 0.51
GGPS1O95749 ZNF890P-202ENST00000530367 1156 ntBASIC18.25■□□□□ 0.51
GGPS1O95749 AC135586.1-201ENST00000539323 574 ntBASIC18.25■□□□□ 0.51
GGPS1O95749 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.25■□□□□ 0.51
GGPS1O95749 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.25■□□□□ 0.51
GGPS1O95749 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.25■□□□□ 0.51
GGPS1O95749 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.25■□□□□ 0.51
GGPS1O95749 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.25■□□□□ 0.51
GGPS1O95749 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.25■□□□□ 0.51
GGPS1O95749 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
GGPS1O95749 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 KRT8P12-202ENST00000472924 1397 ntBASIC18.25■□□□□ 0.51
GGPS1O95749 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.25■□□□□ 0.51
GGPS1O95749 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
GGPS1O95749 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.25■□□□□ 0.51
GGPS1O95749 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
GGPS1O95749 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
GGPS1O95749 U82695.1-201ENST00000635752 1889 ntBASIC18.24■□□□□ 0.51
GGPS1O95749 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
GGPS1O95749 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.24■□□□□ 0.51
GGPS1O95749 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
GGPS1O95749 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
GGPS1O95749 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.24■□□□□ 0.51
GGPS1O95749 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.24■□□□□ 0.51
GGPS1O95749 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
GGPS1O95749 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
GGPS1O95749 SPDYE17-201ENST00000412399 783 ntBASIC18.24■□□□□ 0.51
GGPS1O95749 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.24■□□□□ 0.51
GGPS1O95749 AL139010.1-201ENST00000454878 894 ntBASIC18.24■□□□□ 0.51
GGPS1O95749 SERBP1P3-201ENST00000459980 809 ntBASIC18.24■□□□□ 0.51
GGPS1O95749 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.24■□□□□ 0.51
GGPS1O95749 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.24■□□□□ 0.51
GGPS1O95749 AC044860.1-202ENST00000559481 777 ntBASIC18.24■□□□□ 0.51
GGPS1O95749 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.24■□□□□ 0.51
GGPS1O95749 AC027307.3-201ENST00000594262 1100 ntBASIC18.24■□□□□ 0.51
GGPS1O95749 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 AC025048.6-201ENST00000634326 1161 ntBASIC18.24■□□□□ 0.51
GGPS1O95749 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
GGPS1O95749 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.24■□□□□ 0.51
GGPS1O95749 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.24■□□□□ 0.51
GGPS1O95749 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
GGPS1O95749 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
GGPS1O95749 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
GGPS1O95749 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.23■□□□□ 0.51
GGPS1O95749 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GGPS1O95749 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
GGPS1O95749 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
GGPS1O95749 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms