Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 GNE-204ENST00000539208 2190 ntTSL 2 BASIC24.01■■□□□ 1.43
RAPGEF3O95398 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC24■■□□□ 1.43
RAPGEF3O95398 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RAPGEF3O95398 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF3O95398 PCGF3-213ENST00000620529 1899 ntBASIC24■■□□□ 1.43
RAPGEF3O95398 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF3O95398 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RAPGEF3O95398 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF3O95398 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC24■■□□□ 1.43
RAPGEF3O95398 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF3O95398 MIR1202-201ENST00000408529 83 ntBASIC24■■□□□ 1.43
RAPGEF3O95398 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC24■■□□□ 1.43
RAPGEF3O95398 RPL17P11-201ENST00000417593 544 ntBASIC24■■□□□ 1.43
RAPGEF3O95398 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC24■■□□□ 1.43
RAPGEF3O95398 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC24■■□□□ 1.43
RAPGEF3O95398 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC24■■□□□ 1.43
RAPGEF3O95398 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF3O95398 HNRNPUP1-201ENST00000554987 333 ntBASIC24■■□□□ 1.43
RAPGEF3O95398 CYGB-203ENST00000589145 788 ntTSL 3 BASIC24■■□□□ 1.43
RAPGEF3O95398 NDUFV2P1-201ENST00000596415 907 ntBASIC24■■□□□ 1.43
RAPGEF3O95398 AC091812.3-201ENST00000621362 345 ntBASIC24■■□□□ 1.43
RAPGEF3O95398 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC24■■□□□ 1.43
RAPGEF3O95398 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF3O95398 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC24■■□□□ 1.43
RAPGEF3O95398 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF3O95398 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RAPGEF3O95398 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RAPGEF3O95398 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 AL138709.1-201ENST00000614840 1693 ntBASIC23.99■■□□□ 1.43
RAPGEF3O95398 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 TEX30-203ENST00000376022 828 ntTSL 2 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 DEF8-202ENST00000418391 852 ntTSL 2 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 AL590640.2-201ENST00000457038 527 ntBASIC23.99■■□□□ 1.43
RAPGEF3O95398 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 FTLP10-202ENST00000505798 471 ntBASIC23.99■■□□□ 1.43
RAPGEF3O95398 KSR1-207ENST00000578981 748 ntTSL 4 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 KLK3-207ENST00000595952 969 ntTSL 3 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC23.99■■□□□ 1.43
RAPGEF3O95398 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 AC008764.6-201ENST00000595909 2069 ntBASIC23.99■■□□□ 1.43
RAPGEF3O95398 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAPGEF3O95398 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 HLA-DQB2-229ENST00000411527 1059 ntBASIC23.98■■□□□ 1.43
RAPGEF3O95398 CYP46A4P-201ENST00000414953 267 ntBASIC23.98■■□□□ 1.43
RAPGEF3O95398 APOA2-204ENST00000464492 530 ntTSL 3 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC23.98■■□□□ 1.43
RAPGEF3O95398 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAPGEF3O95398 GUK1-206ENST00000366723 845 ntTSL 5 BASIC23.97■■□□□ 1.43
RAPGEF3O95398 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
RAPGEF3O95398 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RAPGEF3O95398 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC23.97■■□□□ 1.43
RAPGEF3O95398 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC23.97■■□□□ 1.43
RAPGEF3O95398 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RAPGEF3O95398 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC23.97■■□□□ 1.43
RAPGEF3O95398 SLED1-202ENST00000512051 380 ntBASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms