Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.97■□□□□ 0.31
LRCH4O75427 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRCH4O75427 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH4O75427 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH4O75427 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH4O75427 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.96■□□□□ 0.31
LRCH4O75427 AP005117.1-202ENST00000581724 1908 ntBASIC16.96■□□□□ 0.31
LRCH4O75427 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH4O75427 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
LRCH4O75427 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
LRCH4O75427 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
LRCH4O75427 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.96■□□□□ 0.31
LRCH4O75427 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 AC142381.1-201ENST00000426099 345 ntBASIC16.96■□□□□ 0.31
LRCH4O75427 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.96■□□□□ 0.31
LRCH4O75427 RN7SL589P-201ENST00000481268 310 ntBASIC16.96■□□□□ 0.31
LRCH4O75427 KRT8P48-201ENST00000515599 1220 ntBASIC16.96■□□□□ 0.31
LRCH4O75427 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.96■□□□□ 0.31
LRCH4O75427 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.96■□□□□ 0.31
LRCH4O75427 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.96■□□□□ 0.31
LRCH4O75427 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.96■□□□□ 0.31
LRCH4O75427 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 CROCCP1-201ENST00000426910 5675 ntBASIC16.96■□□□□ 0.31
LRCH4O75427 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
LRCH4O75427 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
LRCH4O75427 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH4O75427 AC105917.1-201ENST00000506637 2539 ntBASIC16.96■□□□□ 0.3
LRCH4O75427 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
LRCH4O75427 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
LRCH4O75427 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
LRCH4O75427 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.96■□□□□ 0.3
LRCH4O75427 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.96■□□□□ 0.3
LRCH4O75427 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
LRCH4O75427 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH4O75427 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH4O75427 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
LRCH4O75427 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRCH4O75427 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
LRCH4O75427 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
LRCH4O75427 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 HAUS4P1-201ENST00000406739 1145 ntBASIC16.95■□□□□ 0.3
LRCH4O75427 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 SPCS2P4-201ENST00000436160 681 ntBASIC16.95■□□□□ 0.3
LRCH4O75427 MKNK2P1-201ENST00000437526 628 ntBASIC16.95■□□□□ 0.3
LRCH4O75427 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.95■□□□□ 0.3
LRCH4O75427 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH4O75427 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 AC098859.1-201ENST00000502915 1238 ntBASIC16.95■□□□□ 0.3
LRCH4O75427 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.95■□□□□ 0.3
LRCH4O75427 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.95■□□□□ 0.3
LRCH4O75427 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.95■□□□□ 0.3
LRCH4O75427 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.95■□□□□ 0.3
LRCH4O75427 MTDHP5-201ENST00000598980 586 ntBASIC16.95■□□□□ 0.3
LRCH4O75427 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.95■□□□□ 0.3
LRCH4O75427 AC026120.1-201ENST00000611536 926 ntBASIC16.95■□□□□ 0.3
LRCH4O75427 AC006538.3-201ENST00000612495 578 ntBASIC16.95■□□□□ 0.3
LRCH4O75427 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.95■□□□□ 0.3
LRCH4O75427 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH4O75427 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.95■□□□□ 0.3
LRCH4O75427 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
LRCH4O75427 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
LRCH4O75427 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH4O75427 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH4O75427 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH4O75427 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.94■□□□□ 0.3
LRCH4O75427 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LRCH4O75427 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms