Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SRGAP3O43295 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SRGAP3O43295 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.2■□□□□ 0.82
SRGAP3O43295 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SRGAP3O43295 HLA-DRB6-201ENST00000411500 1235 ntBASIC20.2■□□□□ 0.82
SRGAP3O43295 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.2■□□□□ 0.82
SRGAP3O43295 KLF2P3-201ENST00000451977 1087 ntBASIC20.2■□□□□ 0.82
SRGAP3O43295 AC125807.1-201ENST00000483097 614 ntBASIC20.2■□□□□ 0.82
SRGAP3O43295 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.2■□□□□ 0.82
SRGAP3O43295 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC20.2■□□□□ 0.82
SRGAP3O43295 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.2■□□□□ 0.82
SRGAP3O43295 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.2■□□□□ 0.82
SRGAP3O43295 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.2■□□□□ 0.82
SRGAP3O43295 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.2■□□□□ 0.82
SRGAP3O43295 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.2■□□□□ 0.82
SRGAP3O43295 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SRGAP3O43295 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SRGAP3O43295 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.19■□□□□ 0.82
SRGAP3O43295 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC20.19■□□□□ 0.82
SRGAP3O43295 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
SRGAP3O43295 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
SRGAP3O43295 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.19■□□□□ 0.82
SRGAP3O43295 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC20.19■□□□□ 0.82
SRGAP3O43295 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.19■□□□□ 0.82
SRGAP3O43295 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.19■□□□□ 0.82
SRGAP3O43295 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.19■□□□□ 0.82
SRGAP3O43295 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.19■□□□□ 0.82
SRGAP3O43295 AC093512.1-201ENST00000617969 520 ntBASIC20.19■□□□□ 0.82
SRGAP3O43295 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SRGAP3O43295 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SRGAP3O43295 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC20.19■□□□□ 0.82
SRGAP3O43295 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRGAP3O43295 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRGAP3O43295 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.18■□□□□ 0.82
SRGAP3O43295 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
SRGAP3O43295 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.18■□□□□ 0.82
SRGAP3O43295 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC20.18■□□□□ 0.82
SRGAP3O43295 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRGAP3O43295 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRGAP3O43295 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRGAP3O43295 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.18■□□□□ 0.82
SRGAP3O43295 CYMP-203ENST00000474680 1263 ntBASIC20.18■□□□□ 0.82
SRGAP3O43295 AC067863.1-201ENST00000494933 530 ntBASIC20.18■□□□□ 0.82
SRGAP3O43295 DUX4L27-201ENST00000554796 1261 ntBASIC20.18■□□□□ 0.82
SRGAP3O43295 AC105021.1-202ENST00000570572 669 ntBASIC20.18■□□□□ 0.82
SRGAP3O43295 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRGAP3O43295 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
SRGAP3O43295 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SRGAP3O43295 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms