Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.3■□□□□ 0.2
MID1O15344 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.3■□□□□ 0.2
MID1O15344 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.3■□□□□ 0.2
MID1O15344 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.3■□□□□ 0.2
MID1O15344 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MID1O15344 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.3■□□□□ 0.2
MID1O15344 U82695.1-201ENST00000635752 1889 ntBASIC16.3■□□□□ 0.2
MID1O15344 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.3■□□□□ 0.2
MID1O15344 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MID1O15344 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MID1O15344 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MID1O15344 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MID1O15344 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MID1O15344 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MID1O15344 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
MID1O15344 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MID1O15344 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.3■□□□□ 0.2
MID1O15344 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MID1O15344 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MID1O15344 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.29■□□□□ 0.2
MID1O15344 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 KRT8P12-202ENST00000472924 1397 ntBASIC16.29■□□□□ 0.2
MID1O15344 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.29■□□□□ 0.2
MID1O15344 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.29■□□□□ 0.2
MID1O15344 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.29■□□□□ 0.2
MID1O15344 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.29■□□□□ 0.2
MID1O15344 AL139010.1-201ENST00000454878 894 ntBASIC16.29■□□□□ 0.2
MID1O15344 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.29■□□□□ 0.2
MID1O15344 SPDYE22P-201ENST00000582158 798 ntBASIC16.29■□□□□ 0.2
MID1O15344 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.29■□□□□ 0.2
MID1O15344 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.29■□□□□ 0.2
MID1O15344 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 AC080080.1-201ENST00000625121 2420 ntBASIC16.29■□□□□ 0.2
MID1O15344 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.29■□□□□ 0.2
MID1O15344 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MID1O15344 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
MID1O15344 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
MID1O15344 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.28■□□□□ 0.2
MID1O15344 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
MID1O15344 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MID1O15344 SPDYE17-201ENST00000412399 783 ntBASIC16.28■□□□□ 0.2
MID1O15344 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
MID1O15344 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.28■□□□□ 0.2
MID1O15344 SERBP1P3-201ENST00000459980 809 ntBASIC16.28■□□□□ 0.2
MID1O15344 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 AC044860.1-202ENST00000559481 777 ntBASIC16.28■□□□□ 0.2
MID1O15344 AC027307.3-201ENST00000594262 1100 ntBASIC16.28■□□□□ 0.2
MID1O15344 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 AC025048.6-201ENST00000634326 1161 ntBASIC16.28■□□□□ 0.2
MID1O15344 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
MID1O15344 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MID1O15344 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MID1O15344 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.27■□□□□ 0.2
MID1O15344 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
MID1O15344 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.27■□□□□ 0.2
MID1O15344 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.27■□□□□ 0.2
MID1O15344 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MID1O15344 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms