Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.5■□□□□ 0.07
UPK1AO00322 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UPK1AO00322 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
UPK1AO00322 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
UPK1AO00322 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
UPK1AO00322 BCAR1-209ENST00000546196 1340 ntBASIC15.49■□□□□ 0.07
UPK1AO00322 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
UPK1AO00322 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.49■□□□□ 0.07
UPK1AO00322 AC016027.1-202ENST00000607927 1699 ntBASIC15.49■□□□□ 0.07
UPK1AO00322 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.49■□□□□ 0.07
UPK1AO00322 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
UPK1AO00322 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.49■□□□□ 0.07
UPK1AO00322 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.49■□□□□ 0.07
UPK1AO00322 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.49■□□□□ 0.07
UPK1AO00322 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.49■□□□□ 0.07
UPK1AO00322 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.49■□□□□ 0.07
UPK1AO00322 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.49■□□□□ 0.07
UPK1AO00322 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
UPK1AO00322 AC020765.3-201ENST00000613051 740 ntBASIC15.49■□□□□ 0.07
UPK1AO00322 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.49■□□□□ 0.07
UPK1AO00322 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
UPK1AO00322 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.49■□□□□ 0.07
UPK1AO00322 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK1AO00322 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 AC069224.1-201ENST00000566372 1715 ntBASIC15.48■□□□□ 0.07
UPK1AO00322 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.48■□□□□ 0.07
UPK1AO00322 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.48■□□□□ 0.07
UPK1AO00322 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.48■□□□□ 0.07
UPK1AO00322 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
UPK1AO00322 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.48■□□□□ 0.07
UPK1AO00322 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
UPK1AO00322 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.48■□□□□ 0.07
UPK1AO00322 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.48■□□□□ 0.07
UPK1AO00322 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.48■□□□□ 0.07
UPK1AO00322 KRT19P2-202ENST00000557173 1012 ntBASIC15.48■□□□□ 0.07
UPK1AO00322 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.48■□□□□ 0.07
UPK1AO00322 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
UPK1AO00322 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.48■□□□□ 0.07
UPK1AO00322 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.48■□□□□ 0.07
UPK1AO00322 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.48■□□□□ 0.07
UPK1AO00322 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.48■□□□□ 0.07
UPK1AO00322 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.48■□□□□ 0.07
UPK1AO00322 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
UPK1AO00322 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
UPK1AO00322 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK1AO00322 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.48■□□□□ 0.07
UPK1AO00322 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UPK1AO00322 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK1AO00322 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms