Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX39AO00148 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX39AO00148 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX39AO00148 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
DDX39AO00148 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DDX39AO00148 U82695.1-201ENST00000635752 1889 ntBASIC18.33■□□□□ 0.53
DDX39AO00148 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.33■□□□□ 0.53
DDX39AO00148 PCDH8P1-201ENST00000428983 2773 ntBASIC18.33■□□□□ 0.53
DDX39AO00148 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.33■□□□□ 0.53
DDX39AO00148 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
DDX39AO00148 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.33■□□□□ 0.53
DDX39AO00148 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX39AO00148 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.33■□□□□ 0.53
DDX39AO00148 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
DDX39AO00148 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX39AO00148 BASP1P1-201ENST00000430708 665 ntBASIC18.33■□□□□ 0.52
DDX39AO00148 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.33■□□□□ 0.52
DDX39AO00148 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX39AO00148 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX39AO00148 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX39AO00148 AC061975.2-201ENST00000581722 295 ntBASIC18.33■□□□□ 0.52
DDX39AO00148 AC024267.1-201ENST00000582320 895 ntBASIC18.33■□□□□ 0.52
DDX39AO00148 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
DDX39AO00148 RN7SL828P-201ENST00000607615 303 ntBASIC18.33■□□□□ 0.52
DDX39AO00148 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX39AO00148 AL138828.2-201ENST00000615812 383 ntBASIC18.33■□□□□ 0.52
DDX39AO00148 AC073592.8-201ENST00000624126 511 ntBASIC18.33■□□□□ 0.52
DDX39AO00148 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
DDX39AO00148 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
DDX39AO00148 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DDX39AO00148 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
DDX39AO00148 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DDX39AO00148 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX39AO00148 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX39AO00148 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
DDX39AO00148 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
DDX39AO00148 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
DDX39AO00148 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX39AO00148 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
DDX39AO00148 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX39AO00148 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX39AO00148 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.32■□□□□ 0.52
DDX39AO00148 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX39AO00148 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.32■□□□□ 0.52
DDX39AO00148 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX39AO00148 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX39AO00148 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX39AO00148 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX39AO00148 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX39AO00148 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.31■□□□□ 0.52
DDX39AO00148 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.31■□□□□ 0.52
DDX39AO00148 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DDX39AO00148 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DDX39AO00148 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 REXO1L8P-201ENST00000604378 1897 ntBASIC18.31■□□□□ 0.52
DDX39AO00148 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX39AO00148 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
DDX39AO00148 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DDX39AO00148 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.31■□□□□ 0.52
DDX39AO00148 FAM8A3P-201ENST00000427218 844 ntBASIC18.31■□□□□ 0.52
DDX39AO00148 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.31■□□□□ 0.52
DDX39AO00148 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms