Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 AL035633.1-201ENST00000406139 838 ntBASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 AC003101.2-201ENST00000612557 442 ntBASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
NPIPA3F8WFD2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 AC068587.6-202ENST00000641839 5619 ntBASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 AC142381.1-201ENST00000426099 345 ntBASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 PRYP6-201ENST00000514804 343 ntBASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 AC138761.1-201ENST00000584393 385 ntBASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 AP3S2-216ENST00000617003 1561 ntBASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NPIPA3F8WFD2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 PCDHA14-201ENST00000506751 2298 ntBASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 AC079328.2-201ENST00000561241 3354 ntBASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 AC097493.3-201ENST00000509725 367 ntBASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 RARRES2P9-201ENST00000565168 469 ntBASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 AL158211.3-201ENST00000607385 239 ntBASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 AC018529.1-201ENST00000613063 361 ntBASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 SNX33P1-201ENST00000592116 1762 ntBASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NPIPA3F8WFD2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms