Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HCFC2Q9Y5Z7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 KRT8P22-201ENST00000562317 1415 ntBASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 AL442647.2-201ENST00000429864 857 ntBASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 AL162726.2-201ENST00000438986 1017 ntBASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 CTBP2P5-201ENST00000454986 1264 ntBASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 AL583810.1-201ENST00000553344 1045 ntBASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HCFC2Q9Y5Z7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 AL645608.8-201ENST00000606034 2086 ntBASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 AC133539.2-201ENST00000604757 467 ntBASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 CU634019.7-201ENST00000624153 1185 ntBASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 FP236241.2-201ENST00000624906 1185 ntBASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 AC093525.8-201ENST00000624099 1342 ntBASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 LINC01144-201ENST00000626198 1710 ntBASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HCFC2Q9Y5Z7 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HCFC2Q9Y5Z7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HCFC2Q9Y5Z7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms