Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 LINC01144-201ENST00000626198 1710 ntBASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SNX33P1-201ENST00000592116 1762 ntBASIC13.66□□□□□ -0.22
LIN7CQ9NUP9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AL365209.1-201ENST00000624418 6473 ntBASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AC092910.1-201ENST00000482027 1129 ntBASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AC079776.4-201ENST00000511039 504 ntBASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AC012640.2-201ENST00000561606 901 ntBASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 GGTLC5P-201ENST00000617623 998 ntBASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 PC-214ENST00000628663 1470 ntTSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AC006504.4-201ENST00000592118 1568 ntBASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 HYMAI-201ENST00000635591 3347 ntBASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LIN7CQ9NUP9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.64□□□□□ -0.23
LIN7CQ9NUP9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms