Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 MYCLP1-201ENST00000372451 1075 ntBASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 AC096633.1-201ENST00000422446 749 ntBASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 MINOS1P3-201ENST00000457048 203 ntBASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 IFNL4P1-201ENST00000607083 540 ntBASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFAF3Q9BU61 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 KRT8P47-201ENST00000604727 1398 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 AL845331.1-201ENST00000424978 1190 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 AC246785.2-201ENST00000432512 513 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 KRT17P6-201ENST00000453795 1220 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 AC099336.1-202ENST00000602961 463 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 AC138894.3-201ENST00000603787 634 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 AC004263.2-201ENST00000617183 678 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 AL671710.1-201ENST00000610245 2349 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 MTHFR-217ENST00000641820 1569 ntBASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NDUFAF3Q9BU61 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.72□□□□□ -0.37
NDUFAF3Q9BU61 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms