Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 AC092580.3-201ENST00000430932 139 ntBASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 BANF1P1-201ENST00000553684 263 ntBASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP1Q96SZ6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 BCRP1-201ENST00000444246 691 ntBASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 AL133215.2-201ENST00000609242 977 ntBASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 AL138828.2-201ENST00000615812 383 ntBASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 AC084018.2-201ENST00000613093 2607 ntBASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP1Q96SZ6 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.89■□□□□ 0.3
CDK5RAP1Q96SZ6 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CDK5RAP1Q96SZ6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 SERBP1P3-201ENST00000459980 809 ntBASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 AL079307.3-201ENST00000556114 283 ntBASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 AC092364.2-202ENST00000597012 1073 ntBASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CDK5RAP1Q96SZ6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms