Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
IFT140Q96RY7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
IFT140Q96RY7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
IFT140Q96RY7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC26.42■■□□□ 1.82
IFT140Q96RY7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
IFT140Q96RY7 AL023775.1-201ENST00000454907 1746 ntBASIC26.42■■□□□ 1.82
IFT140Q96RY7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
IFT140Q96RY7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 GGT3P-204ENST00000453783 1664 ntBASIC26.42■■□□□ 1.82
IFT140Q96RY7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
IFT140Q96RY7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 KRT8P35-201ENST00000483942 1338 ntBASIC26.42■■□□□ 1.82
IFT140Q96RY7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
IFT140Q96RY7 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 AC134698.3-201ENST00000523880 214 ntBASIC26.42■■□□□ 1.82
IFT140Q96RY7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC26.42■■□□□ 1.82
IFT140Q96RY7 CROCCP2-202ENST00000412962 2773 ntBASIC26.42■■□□□ 1.82
IFT140Q96RY7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
IFT140Q96RY7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC26.41■■□□□ 1.82
IFT140Q96RY7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
IFT140Q96RY7 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
IFT140Q96RY7 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC26.41■■□□□ 1.82
IFT140Q96RY7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
IFT140Q96RY7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
IFT140Q96RY7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
IFT140Q96RY7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
IFT140Q96RY7 GAPDHP40-201ENST00000505218 1006 ntBASIC26.41■■□□□ 1.82
IFT140Q96RY7 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC26.41■■□□□ 1.82
IFT140Q96RY7 ECM1P1-201ENST00000604092 1279 ntBASIC26.41■■□□□ 1.82
IFT140Q96RY7 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC26.41■■□□□ 1.82
IFT140Q96RY7 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC26.41■■□□□ 1.82
IFT140Q96RY7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC26.41■■□□□ 1.82
IFT140Q96RY7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
IFT140Q96RY7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
IFT140Q96RY7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC26.41■■□□□ 1.82
IFT140Q96RY7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
IFT140Q96RY7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 AC079178.1-201ENST00000420915 656 ntBASIC26.4■■□□□ 1.82
IFT140Q96RY7 AC007274.2-201ENST00000421675 662 ntBASIC26.4■■□□□ 1.82
IFT140Q96RY7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 SERPINA13P-202ENST00000478994 924 ntBASIC26.4■■□□□ 1.82
IFT140Q96RY7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 KLK11-210ENST00000600362 759 ntTSL 3 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
IFT140Q96RY7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC26.4■■□□□ 1.82
IFT140Q96RY7 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
IFT140Q96RY7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
IFT140Q96RY7 ZBTB45P2-201ENST00000452245 1531 ntBASIC26.39■■□□□ 1.82
IFT140Q96RY7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
IFT140Q96RY7 CYP2AB1P-202ENST00000454440 1456 ntBASIC26.39■■□□□ 1.82
IFT140Q96RY7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
IFT140Q96RY7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
IFT140Q96RY7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
IFT140Q96RY7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 NKAIN1P1-201ENST00000435754 582 ntBASIC26.39■■□□□ 1.82
IFT140Q96RY7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
IFT140Q96RY7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
IFT140Q96RY7 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC26.39■■□□□ 1.82
IFT140Q96RY7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
IFT140Q96RY7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC26.39■■□□□ 1.81
IFT140Q96RY7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC26.39■■□□□ 1.81
IFT140Q96RY7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.81
IFT140Q96RY7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
IFT140Q96RY7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms