Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 FOXO1B-201ENST00000504678 1527 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 HTR5BP-201ENST00000430851 1154 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 ACTG1P14-201ENST00000446382 1122 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 KRT8P48-201ENST00000515599 1220 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 AC105233.2-201ENST00000523697 349 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 AF228730.5-201ENST00000530288 346 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 AC027307.2-201ENST00000591252 911 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 AL365330.1-201ENST00000607459 531 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 AC026120.1-201ENST00000611536 926 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 AC008267.7-201ENST00000624570 1194 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 AC007950.2-201ENST00000615045 2347 ntBASIC19.32■□□□□ 0.68
NEK1Q96PY6 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
NEK1Q96PY6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
NEK1Q96PY6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 LINC02447-202ENST00000501888 2146 ntBASIC19.31■□□□□ 0.68
NEK1Q96PY6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.31■□□□□ 0.68
NEK1Q96PY6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 AC069224.1-201ENST00000566372 1715 ntBASIC19.31■□□□□ 0.68
NEK1Q96PY6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.31■□□□□ 0.68
NEK1Q96PY6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NEK1Q96PY6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 AC112504.1-201ENST00000623415 1841 ntBASIC19.3■□□□□ 0.68
NEK1Q96PY6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEK1Q96PY6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 SPDYE11-202ENST00000450699 704 ntBASIC19.3■□□□□ 0.68
NEK1Q96PY6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 RN7SL589P-201ENST00000481268 310 ntBASIC19.3■□□□□ 0.68
NEK1Q96PY6 SPDYE9P-201ENST00000570642 692 ntBASIC19.3■□□□□ 0.68
NEK1Q96PY6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.3■□□□□ 0.68
NEK1Q96PY6 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms