Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 KRT8P37-201ENST00000451609 1420 ntBASIC17.26■□□□□ 0.35
CASD1Q96PB1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CASD1Q96PB1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.26■□□□□ 0.35
CASD1Q96PB1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 RPL13P2-201ENST00000440687 659 ntBASIC17.25■□□□□ 0.35
CASD1Q96PB1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 AC243562.2-201ENST00000561247 970 ntBASIC17.25■□□□□ 0.35
CASD1Q96PB1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.25■□□□□ 0.35
CASD1Q96PB1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CASD1Q96PB1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CASD1Q96PB1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 AC074338.1-201ENST00000416825 156 ntBASIC17.24■□□□□ 0.35
CASD1Q96PB1 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 AC245100.5-201ENST00000452108 331 ntBASIC17.24■□□□□ 0.35
CASD1Q96PB1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 MIR4259-201ENST00000584466 101 ntBASIC17.24■□□□□ 0.35
CASD1Q96PB1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 AC008735.3-201ENST00000596646 500 ntBASIC17.24■□□□□ 0.35
CASD1Q96PB1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 RPSAP52-203ENST00000622976 1023 ntBASIC17.24■□□□□ 0.35
CASD1Q96PB1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CASD1Q96PB1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.24■□□□□ 0.35
CASD1Q96PB1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASD1Q96PB1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CASD1Q96PB1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASD1Q96PB1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.23■□□□□ 0.35
CASD1Q96PB1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CASD1Q96PB1 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CASD1Q96PB1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASD1Q96PB1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CASD1Q96PB1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CASD1Q96PB1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms