Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM43Q96BQ3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 AL607033.1-201ENST00000623900 1599 ntBASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 C1QBPP1-201ENST00000400117 770 ntBASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 TARDBPP1-201ENST00000442013 1203 ntBASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 AC079328.1-201ENST00000560358 952 ntBASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 AL365330.1-201ENST00000607459 531 ntBASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.5■□□□□ 0.39
TRIM43Q96BQ3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 MIR663B-201ENST00000408361 115 ntBASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 AC104306.2-201ENST00000451877 341 ntBASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 AC005252.2-201ENST00000624630 1141 ntBASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 AC090340.1-201ENST00000620778 4980 ntBASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRIM43Q96BQ3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 AC134043.2-201ENST00000624206 2238 ntBASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.48■□□□□ 0.39
TRIM43Q96BQ3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms