Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 FNTAP2-201ENST00000430308 634 ntBASIC20.19■□□□□ 0.82
COL23A1Q86Y22 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 Z93015.1-201ENST00000451718 390 ntBASIC20.19■□□□□ 0.82
COL23A1Q86Y22 MPRIPP1-201ENST00000452433 1089 ntBASIC20.19■□□□□ 0.82
COL23A1Q86Y22 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 ADM-202ENST00000524948 584 ntTSL 2 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 MIR4722-201ENST00000578292 60 ntBASIC20.19■□□□□ 0.82
COL23A1Q86Y22 KC6-205ENST00000599934 556 ntTSL 4 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
COL23A1Q86Y22 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 AC004987.2-201ENST00000395959 1148 ntBASIC20.18■□□□□ 0.82
COL23A1Q86Y22 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 AC005695.3-201ENST00000614522 232 ntBASIC20.18■□□□□ 0.82
COL23A1Q86Y22 GRN-222ENST00000639447 1314 ntTSL 2 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 HARS-202ENST00000415192 1401 ntTSL 2 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 AC138028.6-201ENST00000616106 1482 ntBASIC20.18■□□□□ 0.82
COL23A1Q86Y22 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL23A1Q86Y22 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 AC026471.1-201ENST00000564629 3026 ntBASIC20.17■□□□□ 0.82
COL23A1Q86Y22 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 LETM1P2-201ENST00000597330 2178 ntBASIC20.17■□□□□ 0.82
COL23A1Q86Y22 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 BTBD6P1-201ENST00000412176 1267 ntBASIC20.17■□□□□ 0.82
COL23A1Q86Y22 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 C2orf27AP3-201ENST00000434123 579 ntBASIC20.17■□□□□ 0.82
COL23A1Q86Y22 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 BX284668.4-201ENST00000453917 508 ntBASIC20.17■□□□□ 0.82
COL23A1Q86Y22 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 MIR4706-201ENST00000582134 82 ntBASIC20.17■□□□□ 0.82
COL23A1Q86Y22 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 AL354718.3-201ENST00000616414 581 ntBASIC20.17■□□□□ 0.82
COL23A1Q86Y22 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 CR382287.1-201ENST00000623954 586 ntBASIC20.17■□□□□ 0.82
COL23A1Q86Y22 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COL23A1Q86Y22 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL23A1Q86Y22 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL23A1Q86Y22 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL23A1Q86Y22 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
COL23A1Q86Y22 HINT2P1-201ENST00000419438 481 ntBASIC20.16■□□□□ 0.82
COL23A1Q86Y22 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.16■□□□□ 0.82
COL23A1Q86Y22 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms