Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.97■□□□□ 0.63
USP50Q70EL3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 LINC01144-201ENST00000626198 1710 ntBASIC18.97■□□□□ 0.63
USP50Q70EL3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.97■□□□□ 0.63
USP50Q70EL3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
USP50Q70EL3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.97■□□□□ 0.63
USP50Q70EL3 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
USP50Q70EL3 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.97■□□□□ 0.63
USP50Q70EL3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.97■□□□□ 0.63
USP50Q70EL3 NUS1P3-201ENST00000423502 862 ntBASIC18.97■□□□□ 0.63
USP50Q70EL3 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 MPRIPP1-201ENST00000452433 1089 ntBASIC18.97■□□□□ 0.63
USP50Q70EL3 UPF3AP2-201ENST00000457924 1132 ntBASIC18.97■□□□□ 0.63
USP50Q70EL3 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.97■□□□□ 0.63
USP50Q70EL3 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.97■□□□□ 0.63
USP50Q70EL3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 AP006547.1-201ENST00000563435 692 ntBASIC18.97■□□□□ 0.63
USP50Q70EL3 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.97■□□□□ 0.63
USP50Q70EL3 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC18.97■□□□□ 0.63
USP50Q70EL3 AC005695.3-201ENST00000614522 232 ntBASIC18.97■□□□□ 0.63
USP50Q70EL3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 AC008764.6-201ENST00000595909 2069 ntBASIC18.97■□□□□ 0.63
USP50Q70EL3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.97■□□□□ 0.63
USP50Q70EL3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.97■□□□□ 0.63
USP50Q70EL3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
USP50Q70EL3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
USP50Q70EL3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP50Q70EL3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.96■□□□□ 0.63
USP50Q70EL3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
USP50Q70EL3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.96■□□□□ 0.63
USP50Q70EL3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP50Q70EL3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP50Q70EL3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.96■□□□□ 0.63
USP50Q70EL3 FNTAP2-201ENST00000430308 634 ntBASIC18.96■□□□□ 0.63
USP50Q70EL3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.96■□□□□ 0.63
USP50Q70EL3 KRT18P64-201ENST00000434946 1219 ntBASIC18.96■□□□□ 0.63
USP50Q70EL3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP50Q70EL3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.96■□□□□ 0.63
USP50Q70EL3 AC020914.3-201ENST00000594712 304 ntBASIC18.96■□□□□ 0.63
USP50Q70EL3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP50Q70EL3 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP50Q70EL3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP50Q70EL3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP50Q70EL3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.96■□□□□ 0.63
USP50Q70EL3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.96■□□□□ 0.63
USP50Q70EL3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP50Q70EL3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP50Q70EL3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
USP50Q70EL3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP50Q70EL3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
USP50Q70EL3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.96■□□□□ 0.63
USP50Q70EL3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
USP50Q70EL3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
USP50Q70EL3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.95■□□□□ 0.62
USP50Q70EL3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.95■□□□□ 0.62
USP50Q70EL3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.95■□□□□ 0.62
USP50Q70EL3 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC18.95■□□□□ 0.62
USP50Q70EL3 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.95■□□□□ 0.62
USP50Q70EL3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
USP50Q70EL3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.95■□□□□ 0.62
USP50Q70EL3 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 MIR4722-201ENST00000578292 60 ntBASIC18.95■□□□□ 0.62
USP50Q70EL3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
USP50Q70EL3 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC18.95■□□□□ 0.62
USP50Q70EL3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.95■□□□□ 0.62
USP50Q70EL3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
USP50Q70EL3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
USP50Q70EL3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
USP50Q70EL3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.95■□□□□ 0.62
USP50Q70EL3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.94■□□□□ 0.62
USP50Q70EL3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP50Q70EL3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP50Q70EL3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.94■□□□□ 0.62
USP50Q70EL3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP50Q70EL3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP50Q70EL3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms