Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.25■□□□□ 0.35
VARS2Q5ST30 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 AL133445.2-201ENST00000611191 527 ntBASIC17.25■□□□□ 0.35
VARS2Q5ST30 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.25■□□□□ 0.35
VARS2Q5ST30 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.25■□□□□ 0.35
VARS2Q5ST30 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.25■□□□□ 0.35
VARS2Q5ST30 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARS2Q5ST30 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
VARS2Q5ST30 BTBD7P1-201ENST00000447253 1453 ntBASIC17.24■□□□□ 0.35
VARS2Q5ST30 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 AC044860.1-202ENST00000559481 777 ntBASIC17.24■□□□□ 0.35
VARS2Q5ST30 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 AL033527.5-202ENST00000641632 1098 ntBASIC17.24■□□□□ 0.35
VARS2Q5ST30 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.24■□□□□ 0.35
VARS2Q5ST30 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VARS2Q5ST30 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 AC106886.4-201ENST00000623557 2502 ntBASIC17.23■□□□□ 0.35
VARS2Q5ST30 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 POU5F1P6-201ENST00000466990 990 ntBASIC17.23■□□□□ 0.35
VARS2Q5ST30 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 AC104794.3-201ENST00000566840 1248 ntBASIC17.23■□□□□ 0.35
VARS2Q5ST30 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 AC022211.2-201ENST00000585075 2527 ntBASIC17.23■□□□□ 0.35
VARS2Q5ST30 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.23■□□□□ 0.35
VARS2Q5ST30 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VARS2Q5ST30 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VARS2Q5ST30 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.22■□□□□ 0.35
VARS2Q5ST30 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms