Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC93Q567U6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC93Q567U6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC93Q567U6 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC93Q567U6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC93Q567U6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC93Q567U6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC93Q567U6 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC93Q567U6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC19.93■□□□□ 0.78
CCDC93Q567U6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC93Q567U6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC93Q567U6 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC93Q567U6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.93■□□□□ 0.78
CCDC93Q567U6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC93Q567U6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC93Q567U6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC93Q567U6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC93Q567U6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CCDC93Q567U6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 MIR1908-201ENST00000410394 80 ntBASIC19.92■□□□□ 0.78
CCDC93Q567U6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 AL583810.1-201ENST00000553344 1045 ntBASIC19.92■□□□□ 0.78
CCDC93Q567U6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 MIR6869-201ENST00000619434 62 ntBASIC19.92■□□□□ 0.78
CCDC93Q567U6 AL139011.1-202ENST00000642063 584 ntBASIC19.92■□□□□ 0.78
CCDC93Q567U6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC93Q567U6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CCDC93Q567U6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 CTBP2P5-201ENST00000454986 1264 ntBASIC19.91■□□□□ 0.78
CCDC93Q567U6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.91■□□□□ 0.78
CCDC93Q567U6 PDIA3P1-201ENST00000471856 1510 ntBASIC19.91■□□□□ 0.78
CCDC93Q567U6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC93Q567U6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC93Q567U6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
CCDC93Q567U6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC93Q567U6 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC93Q567U6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC93Q567U6 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC93Q567U6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC93Q567U6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CCDC93Q567U6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC93Q567U6 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC93Q567U6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC93Q567U6 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC93Q567U6 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC93Q567U6 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC93Q567U6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
CCDC93Q567U6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.9■□□□□ 0.78
CCDC93Q567U6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
CCDC93Q567U6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC93Q567U6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms