Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 REXO1L8P-201ENST00000604378 1897 ntBASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 AC079776.1-201ENST00000401540 1152 ntBASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 RN7SL752P-201ENST00000463779 287 ntBASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 GIMAP3P-201ENST00000495150 836 ntBASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 MIR6069-201ENST00000620069 79 ntBASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 AZGP1P1-201ENST00000411909 902 ntBASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHROOM1Q2M3G4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SHROOM1Q2M3G4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.89■□□□□ 0.62
SHROOM1Q2M3G4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 AP006294.1-201ENST00000415407 339 ntBASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 MYCLP2-201ENST00000449268 967 ntBASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 RN7SL837P-201ENST00000463010 287 ntBASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 AC055876.2-201ENST00000531834 546 ntBASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 AC026471.1-201ENST00000564629 3026 ntBASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.89■□□□□ 0.61
SHROOM1Q2M3G4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.88■□□□□ 0.61
SHROOM1Q2M3G4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM1Q2M3G4 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM1Q2M3G4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.88■□□□□ 0.61
SHROOM1Q2M3G4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM1Q2M3G4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM1Q2M3G4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM1Q2M3G4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHROOM1Q2M3G4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms