Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 ENPP7P5-201ENST00000541031 1031 ntBASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 AC005702.4-201ENST00000618393 416 ntBASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 AL021920.2-201ENST00000624828 1351 ntBASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RSPO4Q2I0M5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
RSPO4Q2I0M5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RSPO4Q2I0M5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RSPO4Q2I0M5 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RSPO4Q2I0M5 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 LETM1P2-201ENST00000597330 2178 ntBASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 AC007969.1-201ENST00000433675 447 ntBASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 Z93015.1-201ENST00000451718 390 ntBASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 BX284668.4-201ENST00000453917 508 ntBASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 AC091804.1-201ENST00000486888 567 ntBASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 HIST2H2BC-201ENST00000498492 580 ntBASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RSPO4Q2I0M5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RSPO4Q2I0M5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms