Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC9.88□□□□□ -0.83
HSPG2P98160 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
HSPG2P98160 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC9.88□□□□□ -0.83
HSPG2P98160 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
HSPG2P98160 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 AP000974.1-201ENST00000623909 2387 ntBASIC9.87□□□□□ -0.83
HSPG2P98160 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
HSPG2P98160 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC9.87□□□□□ -0.83
HSPG2P98160 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC9.87□□□□□ -0.83
HSPG2P98160 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC9.87□□□□□ -0.83
HSPG2P98160 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC9.87□□□□□ -0.83
HSPG2P98160 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
HSPG2P98160 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC9.87□□□□□ -0.83
HSPG2P98160 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 AC136604.1-201ENST00000418535 575 ntBASIC9.87□□□□□ -0.83
HSPG2P98160 PTPA-218ENST00000435132 618 ntTSL 2 BASIC9.87□□□□□ -0.83
HSPG2P98160 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC9.87□□□□□ -0.83
HSPG2P98160 GPX4-206ENST00000588919 803 ntTSL 2 BASIC9.87□□□□□ -0.83
HSPG2P98160 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC9.87□□□□□ -0.83
HSPG2P98160 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC9.87□□□□□ -0.83
HSPG2P98160 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC9.87□□□□□ -0.83
HSPG2P98160 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 AC092068.3-201ENST00000587894 2016 ntBASIC9.87□□□□□ -0.83
HSPG2P98160 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC9.87□□□□□ -0.83
HSPG2P98160 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC9.87□□□□□ -0.83
HSPG2P98160 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
HSPG2P98160 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
HSPG2P98160 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC9.87□□□□□ -0.83
HSPG2P98160 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 FO393414.2-201ENST00000405153 598 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 CNN2P10-201ENST00000443067 918 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC9.86□□□□□ -0.83
HSPG2P98160 RNA5SP486-201ENST00000515961 83 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 SDHD-202ENST00000525291 790 ntTSL 3 BASIC9.86□□□□□ -0.83
HSPG2P98160 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC9.86□□□□□ -0.83
HSPG2P98160 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC9.86□□□□□ -0.83
HSPG2P98160 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC9.86□□□□□ -0.83
HSPG2P98160 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC9.86□□□□□ -0.83
HSPG2P98160 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
HSPG2P98160 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 BAATP1-201ENST00000412284 1225 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
HSPG2P98160 AC005730.2-201ENST00000564549 1184 ntBASIC9.86□□□□□ -0.83
HSPG2P98160 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
HSPG2P98160 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms