Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SNRPFP62306 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.7■□□□□ 0.42
SNRPFP62306 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.7■□□□□ 0.42
SNRPFP62306 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SNRPFP62306 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SNRPFP62306 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.7■□□□□ 0.42
SNRPFP62306 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNRPFP62306 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.7■□□□□ 0.42
SNRPFP62306 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.7■□□□□ 0.42
SNRPFP62306 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.7■□□□□ 0.42
SNRPFP62306 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.7■□□□□ 0.42
SNRPFP62306 SNHG9-202ENST00000564014 471 ntBASIC17.7■□□□□ 0.42
SNRPFP62306 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
SNRPFP62306 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
SNRPFP62306 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SNRPFP62306 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SNRPFP62306 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.7■□□□□ 0.42
SNRPFP62306 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.7■□□□□ 0.42
SNRPFP62306 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SNRPFP62306 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SNRPFP62306 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 LINC02447-202ENST00000501888 2146 ntBASIC17.69■□□□□ 0.42
SNRPFP62306 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SNRPFP62306 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.69■□□□□ 0.42
SNRPFP62306 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.69■□□□□ 0.42
SNRPFP62306 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 AC004987.2-201ENST00000395959 1148 ntBASIC17.69■□□□□ 0.42
SNRPFP62306 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.69■□□□□ 0.42
SNRPFP62306 RPS8P6-201ENST00000426177 609 ntBASIC17.69■□□□□ 0.42
SNRPFP62306 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.69■□□□□ 0.42
SNRPFP62306 AL139010.1-201ENST00000454878 894 ntBASIC17.69■□□□□ 0.42
SNRPFP62306 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.69■□□□□ 0.42
SNRPFP62306 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.69■□□□□ 0.42
SNRPFP62306 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SNRPFP62306 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.69■□□□□ 0.42
SNRPFP62306 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.69■□□□□ 0.42
SNRPFP62306 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.69■□□□□ 0.42
SNRPFP62306 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.69■□□□□ 0.42
SNRPFP62306 AC018529.1-201ENST00000613063 361 ntBASIC17.69■□□□□ 0.42
SNRPFP62306 AP001059.3-201ENST00000619053 235 ntBASIC17.69■□□□□ 0.42
SNRPFP62306 AC112504.1-201ENST00000623415 1841 ntBASIC17.69■□□□□ 0.42
SNRPFP62306 PCDH8P1-201ENST00000428983 2773 ntBASIC17.69■□□□□ 0.42
SNRPFP62306 AL691432.1-201ENST00000596308 1422 ntBASIC17.69■□□□□ 0.42
SNRPFP62306 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SNRPFP62306 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.69■□□□□ 0.42
SNRPFP62306 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNRPFP62306 AC024909.3-201ENST00000611513 2257 ntBASIC17.68■□□□□ 0.42
SNRPFP62306 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SNRPFP62306 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SNRPFP62306 RBPMS2P1-201ENST00000437762 623 ntBASIC17.68■□□□□ 0.42
SNRPFP62306 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.68■□□□□ 0.42
SNRPFP62306 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.68■□□□□ 0.42
SNRPFP62306 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.68■□□□□ 0.42
SNRPFP62306 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.68■□□□□ 0.42
SNRPFP62306 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.68■□□□□ 0.42
SNRPFP62306 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.68■□□□□ 0.42
SNRPFP62306 AL365203.3-201ENST00000609742 2057 ntBASIC17.68■□□□□ 0.42
SNRPFP62306 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNRPFP62306 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.68■□□□□ 0.42
SNRPFP62306 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNRPFP62306 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SNRPFP62306 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNRPFP62306 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms