Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDH11P55287 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDH11P55287 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDH11P55287 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.05■□□□□ 0
CDH11P55287 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.05■□□□□ 0
CDH11P55287 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CDH11P55287 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CDH11P55287 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
CDH11P55287 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CDH11P55287 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
CDH11P55287 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.05■□□□□ 0
CDH11P55287 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
CDH11P55287 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.05■□□□□ -0
CDH11P55287 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.05■□□□□ -0
CDH11P55287 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.05■□□□□ -0
CDH11P55287 ELK2BP-201ENST00000415014 1224 ntBASIC15.05■□□□□ -0
CDH11P55287 KRT18P27-201ENST00000427733 1299 ntBASIC15.05■□□□□ -0
CDH11P55287 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.05■□□□□ -0
CDH11P55287 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.05■□□□□ -0
CDH11P55287 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.05■□□□□ -0
CDH11P55287 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.05■□□□□ -0
CDH11P55287 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH11P55287 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.05■□□□□ -0
CDH11P55287 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CDH11P55287 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CDH11P55287 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.05■□□□□ -0
CDH11P55287 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH11P55287 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH11P55287 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.05■□□□□ -0
CDH11P55287 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.05■□□□□ -0
CDH11P55287 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
CDH11P55287 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
CDH11P55287 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
CDH11P55287 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.05■□□□□ -0
CDH11P55287 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.05■□□□□ -0
CDH11P55287 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CDH11P55287 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
CDH11P55287 AC092384.3-202ENST00000564646 2873 ntBASIC15.05■□□□□ -0
CDH11P55287 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
CDH11P55287 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.04■□□□□ -0
CDH11P55287 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.04■□□□□ -0
CDH11P55287 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CDH11P55287 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH11P55287 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.04■□□□□ -0
CDH11P55287 AC104640.1-201ENST00000562617 2109 ntBASIC15.04■□□□□ -0
CDH11P55287 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH11P55287 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.04■□□□□ -0
CDH11P55287 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.04■□□□□ -0
CDH11P55287 MIR1233-2-201ENST00000408138 82 ntBASIC15.04■□□□□ -0
CDH11P55287 MIR1233-1-201ENST00000408722 82 ntBASIC15.04■□□□□ -0
CDH11P55287 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.04■□□□□ -0
CDH11P55287 AC108751.1-201ENST00000490852 363 ntBASIC15.04■□□□□ -0
CDH11P55287 RNA5SP416-201ENST00000516838 111 ntBASIC15.04■□□□□ -0
CDH11P55287 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CDH11P55287 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.04■□□□□ -0
CDH11P55287 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.04■□□□□ -0
CDH11P55287 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.04■□□□□ -0
CDH11P55287 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.04■□□□□ -0
CDH11P55287 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.04■□□□□ -0
CDH11P55287 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
CDH11P55287 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDH11P55287 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.04■□□□□ -0
CDH11P55287 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.04■□□□□ -0
CDH11P55287 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CDH11P55287 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CDH11P55287 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.04■□□□□ -0
CDH11P55287 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.04■□□□□ -0
CDH11P55287 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CDH11P55287 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CDH11P55287 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CDH11P55287 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms