Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 RARRES2P9-201ENST00000565168 469 ntBASIC17.34■□□□□ 0.37
CACNA2D1P54289 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 AC051619.7-201ENST00000568314 623 ntBASIC17.34■□□□□ 0.37
CACNA2D1P54289 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 AC015911.4-201ENST00000588022 1070 ntBASIC17.34■□□□□ 0.37
CACNA2D1P54289 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 AL390955.2-201ENST00000603032 514 ntBASIC17.34■□□□□ 0.37
CACNA2D1P54289 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 SPTSSB-204ENST00000617024 1292 ntBASIC17.34■□□□□ 0.37
CACNA2D1P54289 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CACNA2D1P54289 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.34■□□□□ 0.37
CACNA2D1P54289 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.33■□□□□ 0.37
CACNA2D1P54289 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D1P54289 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.33■□□□□ 0.37
CACNA2D1P54289 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D1P54289 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D1P54289 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.33■□□□□ 0.37
CACNA2D1P54289 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D1P54289 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.33■□□□□ 0.37
CACNA2D1P54289 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D1P54289 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.33■□□□□ 0.37
CACNA2D1P54289 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D1P54289 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CACNA2D1P54289 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.33■□□□□ 0.36
CACNA2D1P54289 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 MIR4453-201ENST00000584019 89 ntBASIC17.33■□□□□ 0.36
CACNA2D1P54289 MIR6080-201ENST00000617359 66 ntBASIC17.33■□□□□ 0.36
CACNA2D1P54289 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.33■□□□□ 0.36
CACNA2D1P54289 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CACNA2D1P54289 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 AC079328.2-201ENST00000561241 3354 ntBASIC17.32■□□□□ 0.36
CACNA2D1P54289 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 TUBB3P1-201ENST00000405796 1332 ntBASIC17.32■□□□□ 0.36
CACNA2D1P54289 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CACNA2D1P54289 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.32■□□□□ 0.36
CACNA2D1P54289 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms