Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 BANF1P1-201ENST00000553684 263 ntBASIC18.41■□□□□ 0.54
USP11P51784 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.41■□□□□ 0.54
USP11P51784 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.41■□□□□ 0.54
USP11P51784 RN7SL828P-201ENST00000607615 303 ntBASIC18.41■□□□□ 0.54
USP11P51784 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
USP11P51784 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.41■□□□□ 0.54
USP11P51784 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.41■□□□□ 0.54
USP11P51784 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.41■□□□□ 0.54
USP11P51784 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
USP11P51784 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP11P51784 CYP2T1P-202ENST00000641596 2535 ntBASIC18.41■□□□□ 0.54
USP11P51784 AL596087.1-201ENST00000400979 1969 ntBASIC18.41■□□□□ 0.54
USP11P51784 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.4■□□□□ 0.54
USP11P51784 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
USP11P51784 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
USP11P51784 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.4■□□□□ 0.54
USP11P51784 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.4■□□□□ 0.54
USP11P51784 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.4■□□□□ 0.54
USP11P51784 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.4■□□□□ 0.54
USP11P51784 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.4■□□□□ 0.54
USP11P51784 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.4■□□□□ 0.54
USP11P51784 AC140878.1-201ENST00000565277 250 ntBASIC18.4■□□□□ 0.54
USP11P51784 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
USP11P51784 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.4■□□□□ 0.54
USP11P51784 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.4■□□□□ 0.54
USP11P51784 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.4■□□□□ 0.54
USP11P51784 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.4■□□□□ 0.54
USP11P51784 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.4■□□□□ 0.54
USP11P51784 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP11P51784 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.4■□□□□ 0.54
USP11P51784 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
USP11P51784 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
USP11P51784 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.4■□□□□ 0.54
USP11P51784 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
USP11P51784 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
USP11P51784 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP11P51784 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.39■□□□□ 0.53
USP11P51784 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
USP11P51784 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
USP11P51784 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.39■□□□□ 0.53
USP11P51784 AL139010.1-201ENST00000454878 894 ntBASIC18.39■□□□□ 0.53
USP11P51784 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.39■□□□□ 0.53
USP11P51784 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.39■□□□□ 0.53
USP11P51784 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 AL133215.2-201ENST00000609242 977 ntBASIC18.39■□□□□ 0.53
USP11P51784 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.39■□□□□ 0.53
USP11P51784 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.39■□□□□ 0.53
USP11P51784 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.39■□□□□ 0.53
USP11P51784 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.39■□□□□ 0.53
USP11P51784 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP11P51784 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.39■□□□□ 0.53
USP11P51784 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms