Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AP001005.1-201ENST00000571755 1248 ntBASIC14.43□□□□□ -0.1
CX3CR1P49238 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.43□□□□□ -0.1
CX3CR1P49238 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.43□□□□□ -0.1
CX3CR1P49238 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.43□□□□□ -0.1
CX3CR1P49238 AC116407.3-201ENST00000623905 1129 ntBASIC14.43□□□□□ -0.1
CX3CR1P49238 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.43□□□□□ -0.1
CX3CR1P49238 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CX3CR1P49238 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 AC132872.4-202ENST00000622924 2756 ntBASIC14.43□□□□□ -0.1
CX3CR1P49238 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CX3CR1P49238 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.43□□□□□ -0.1
CX3CR1P49238 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.43□□□□□ -0.1
CX3CR1P49238 HYMAI-201ENST00000635591 3347 ntBASIC14.43□□□□□ -0.1
CX3CR1P49238 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.42□□□□□ -0.1
CX3CR1P49238 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CX3CR1P49238 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.42□□□□□ -0.1
CX3CR1P49238 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
CX3CR1P49238 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.42□□□□□ -0.1
CX3CR1P49238 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CX3CR1P49238 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.42□□□□□ -0.1
CX3CR1P49238 RNU1-129P-201ENST00000384064 167 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 MRPL3P1-201ENST00000400109 1033 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 CRYGEP-201ENST00000412192 528 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 VN2R19P-201ENST00000442399 1052 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.42□□□□□ -0.1
CX3CR1P49238 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.42□□□□□ -0.1
CX3CR1P49238 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.42□□□□□ -0.1
CX3CR1P49238 KRT126P-201ENST00000549467 1181 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.42□□□□□ -0.1
CX3CR1P49238 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.42□□□□□ -0.1
CX3CR1P49238 AL031432.2-201ENST00000566714 459 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 AL928711.1-201ENST00000570165 459 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.42□□□□□ -0.1
CX3CR1P49238 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
CX3CR1P49238 U1.21-201ENST00000580816 167 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 AC021097.1-201ENST00000607902 574 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 AL645728.2-201ENST00000641974 660 ntBASIC14.42□□□□□ -0.1
CX3CR1P49238 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CX3CR1P49238 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.42□□□□□ -0.1
CX3CR1P49238 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.42□□□□□ -0.1
CX3CR1P49238 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CX3CR1P49238 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CX3CR1P49238 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.42□□□□□ -0.1
CX3CR1P49238 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.42□□□□□ -0.1
CX3CR1P49238 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.41□□□□□ -0.1
CX3CR1P49238 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CX3CR1P49238 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.41□□□□□ -0.1
CX3CR1P49238 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CX3CR1P49238 HMGA1P7-201ENST00000406908 502 ntBASIC14.41□□□□□ -0.1
CX3CR1P49238 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CX3CR1P49238 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CX3CR1P49238 AC009947.1-201ENST00000444350 727 ntBASIC14.41□□□□□ -0.1
CX3CR1P49238 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CX3CR1P49238 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
CX3CR1P49238 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms