Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
GABRA3P34903 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.23■□□□□ 0.03
GABRA3P34903 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
GABRA3P34903 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA3P34903 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA3P34903 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GABRA3P34903 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
GABRA3P34903 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.22■□□□□ 0.03
GABRA3P34903 AL592424.1-201ENST00000563624 1536 ntBASIC15.22■□□□□ 0.03
GABRA3P34903 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA3P34903 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GABRA3P34903 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA3P34903 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA3P34903 AC008741.2-201ENST00000612792 3115 ntBASIC15.22■□□□□ 0.03
GABRA3P34903 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA3P34903 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GABRA3P34903 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.22■□□□□ 0.03
GABRA3P34903 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA3P34903 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.22■□□□□ 0.03
GABRA3P34903 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.22■□□□□ 0.03
GABRA3P34903 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 MTDHP5-201ENST00000598980 586 ntBASIC15.22■□□□□ 0.03
GABRA3P34903 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 AC092902.6-201ENST00000641783 218 ntBASIC15.22■□□□□ 0.03
GABRA3P34903 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
GABRA3P34903 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GABRA3P34903 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.22■□□□□ 0.03
GABRA3P34903 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GABRA3P34903 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.22■□□□□ 0.03
GABRA3P34903 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.21■□□□□ 0.03
GABRA3P34903 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.21■□□□□ 0.03
GABRA3P34903 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.21■□□□□ 0.03
GABRA3P34903 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GABRA3P34903 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.21■□□□□ 0.03
GABRA3P34903 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.21■□□□□ 0.03
GABRA3P34903 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.21■□□□□ 0.03
GABRA3P34903 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GABRA3P34903 TFAMP1-201ENST00000412727 736 ntBASIC15.21■□□□□ 0.03
GABRA3P34903 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
GABRA3P34903 PRYP6-201ENST00000514804 343 ntBASIC15.21■□□□□ 0.03
GABRA3P34903 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.21■□□□□ 0.03
GABRA3P34903 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.21■□□□□ 0.03
GABRA3P34903 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.21■□□□□ 0.03
GABRA3P34903 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 C20orf181-201ENST00000623918 480 ntBASIC15.21■□□□□ 0.03
GABRA3P34903 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.21■□□□□ 0.03
GABRA3P34903 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.21■□□□□ 0.03
GABRA3P34903 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GABRA3P34903 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.21■□□□□ 0.03
GABRA3P34903 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.21■□□□□ 0.03
GABRA3P34903 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GABRA3P34903 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.21■□□□□ 0.03
GABRA3P34903 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.21■□□□□ 0.02
GABRA3P34903 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GABRA3P34903 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GABRA3P34903 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
GABRA3P34903 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
GABRA3P34903 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
GABRA3P34903 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GABRA3P34903 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
GABRA3P34903 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GABRA3P34903 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA3P34903 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA3P34903 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA3P34903 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA3P34903 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GABRA3P34903 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.2■□□□□ 0.02
GABRA3P34903 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms