Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CAPN3P20807 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CAPN3P20807 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CAPN3P20807 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CAPN3P20807 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN3P20807 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.79■□□□□ 0.12
CAPN3P20807 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN3P20807 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN3P20807 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN3P20807 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN3P20807 MIR7706-201ENST00000613747 67 ntBASIC15.79■□□□□ 0.12
CAPN3P20807 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.79■□□□□ 0.12
CAPN3P20807 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CAPN3P20807 AC004706.3-202ENST00000621574 984 ntBASIC15.79■□□□□ 0.12
CAPN3P20807 AL355877.3-201ENST00000622820 899 ntBASIC15.79■□□□□ 0.12
CAPN3P20807 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CAPN3P20807 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN3P20807 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CAPN3P20807 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.79■□□□□ 0.12
CAPN3P20807 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.79■□□□□ 0.12
CAPN3P20807 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CAPN3P20807 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN3P20807 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN3P20807 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CAPN3P20807 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN3P20807 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CAPN3P20807 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN3P20807 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CAPN3P20807 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.78■□□□□ 0.12
CAPN3P20807 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN3P20807 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.78■□□□□ 0.12
CAPN3P20807 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN3P20807 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN3P20807 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.78■□□□□ 0.12
CAPN3P20807 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
CAPN3P20807 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CAPN3P20807 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 PPT1-215ENST00000641471 2368 ntBASIC15.78■□□□□ 0.12
CAPN3P20807 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.78■□□□□ 0.12
CAPN3P20807 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.78■□□□□ 0.12
CAPN3P20807 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CAPN3P20807 AL353732.1-201ENST00000569618 1459 ntBASIC15.78■□□□□ 0.12
CAPN3P20807 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN3P20807 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN3P20807 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN3P20807 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN3P20807 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.77■□□□□ 0.12
CAPN3P20807 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN3P20807 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN3P20807 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN3P20807 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN3P20807 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CAPN3P20807 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.77■□□□□ 0.12
CAPN3P20807 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.77■□□□□ 0.12
CAPN3P20807 MED15P5-201ENST00000423150 992 ntBASIC15.77■□□□□ 0.12
CAPN3P20807 GPX1P2-201ENST00000429271 606 ntBASIC15.77■□□□□ 0.12
CAPN3P20807 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 243.1 ms