Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.22■□□□□ 0.03
PRKCAP17252 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRKCAP17252 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PRKCAP17252 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.21■□□□□ 0.03
PRKCAP17252 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRKCAP17252 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.21■□□□□ 0.03
PRKCAP17252 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.21■□□□□ 0.03
PRKCAP17252 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRKCAP17252 AC006538.1-201ENST00000567905 1585 ntBASIC15.21■□□□□ 0.03
PRKCAP17252 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRKCAP17252 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRKCAP17252 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PRKCAP17252 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.21■□□□□ 0.03
PRKCAP17252 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.21■□□□□ 0.03
PRKCAP17252 KRT18P3-201ENST00000451602 1288 ntBASIC15.21■□□□□ 0.03
PRKCAP17252 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
PRKCAP17252 RNA5SP416-201ENST00000516838 111 ntBASIC15.21■□□□□ 0.03
PRKCAP17252 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.21■□□□□ 0.03
PRKCAP17252 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.21■□□□□ 0.03
PRKCAP17252 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PRKCAP17252 AC023141.13-201ENST00000604991 943 ntBASIC15.21■□□□□ 0.03
PRKCAP17252 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.21■□□□□ 0.03
PRKCAP17252 AC007064.4-201ENST00000637740 555 ntBASIC15.21■□□□□ 0.03
PRKCAP17252 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.21■□□□□ 0.03
PRKCAP17252 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PRKCAP17252 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRKCAP17252 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRKCAP17252 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PRKCAP17252 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
PRKCAP17252 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.21■□□□□ 0.03
PRKCAP17252 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.21■□□□□ 0.03
PRKCAP17252 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PRKCAP17252 AC006449.5-201ENST00000610658 2098 ntBASIC15.21■□□□□ 0.03
PRKCAP17252 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
PRKCAP17252 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
PRKCAP17252 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRKCAP17252 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.21■□□□□ 0.02
PRKCAP17252 AL671710.1-201ENST00000610245 2349 ntBASIC15.21■□□□□ 0.02
PRKCAP17252 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PRKCAP17252 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.21■□□□□ 0.02
PRKCAP17252 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.21■□□□□ 0.02
PRKCAP17252 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PRKCAP17252 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PRKCAP17252 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRKCAP17252 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
PRKCAP17252 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.2■□□□□ 0.02
PRKCAP17252 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRKCAP17252 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.2■□□□□ 0.02
PRKCAP17252 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.2■□□□□ 0.02
PRKCAP17252 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 MIR574-201ENST00000385209 96 ntBASIC15.2■□□□□ 0.02
PRKCAP17252 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.2■□□□□ 0.02
PRKCAP17252 HMGA1P7-201ENST00000406908 502 ntBASIC15.2■□□□□ 0.02
PRKCAP17252 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PRKCAP17252 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.2■□□□□ 0.02
PRKCAP17252 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
PRKCAP17252 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.2■□□□□ 0.02
PRKCAP17252 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.2■□□□□ 0.02
PRKCAP17252 AL031432.2-201ENST00000566714 459 ntBASIC15.2■□□□□ 0.02
PRKCAP17252 AL928711.1-201ENST00000570165 459 ntBASIC15.2■□□□□ 0.02
PRKCAP17252 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.2■□□□□ 0.02
PRKCAP17252 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.2■□□□□ 0.02
PRKCAP17252 AC004877.2-201ENST00000623941 599 ntBASIC15.2■□□□□ 0.02
PRKCAP17252 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.2■□□□□ 0.02
PRKCAP17252 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.2■□□□□ 0.02
PRKCAP17252 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRKCAP17252 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRKCAP17252 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms