Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 RPS2P32-201ENST00000439199 892 ntBASIC18.08■□□□□ 0.48
ATP2A2P16615 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.08■□□□□ 0.48
ATP2A2P16615 RN7SL752P-201ENST00000463779 287 ntBASIC18.08■□□□□ 0.48
ATP2A2P16615 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP2A2P16615 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.08■□□□□ 0.48
ATP2A2P16615 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 AC073389.1-201ENST00000595595 795 ntBASIC18.08■□□□□ 0.48
ATP2A2P16615 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.08■□□□□ 0.48
ATP2A2P16615 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.08■□□□□ 0.48
ATP2A2P16615 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.08■□□□□ 0.48
ATP2A2P16615 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.08■□□□□ 0.48
ATP2A2P16615 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
ATP2A2P16615 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.08■□□□□ 0.48
ATP2A2P16615 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.08■□□□□ 0.48
ATP2A2P16615 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.08■□□□□ 0.48
ATP2A2P16615 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
ATP2A2P16615 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A2P16615 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ATP2A2P16615 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ATP2A2P16615 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A2P16615 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATP2A2P16615 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A2P16615 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A2P16615 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A2P16615 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATP2A2P16615 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A2P16615 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A2P16615 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.07■□□□□ 0.48
ATP2A2P16615 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ATP2A2P16615 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ATP2A2P16615 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
ATP2A2P16615 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 DGCR5-201ENST00000399539 862 ntBASIC18.07■□□□□ 0.48
ATP2A2P16615 AL512384.1-201ENST00000406683 331 ntBASIC18.07■□□□□ 0.48
ATP2A2P16615 AP006294.1-201ENST00000415407 339 ntBASIC18.07■□□□□ 0.48
ATP2A2P16615 AL353705.2-201ENST00000428243 662 ntBASIC18.07■□□□□ 0.48
ATP2A2P16615 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ATP2A2P16615 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.07■□□□□ 0.48
ATP2A2P16615 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ATP2A2P16615 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A2P16615 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
ATP2A2P16615 AL844908.2-201ENST00000609461 460 ntBASIC18.07■□□□□ 0.48
ATP2A2P16615 AL162274.1-201ENST00000617191 1098 ntBASIC18.07■□□□□ 0.48
ATP2A2P16615 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A2P16615 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.07■□□□□ 0.48
ATP2A2P16615 CETN4P-206ENST00000642099 2168 ntBASIC18.07■□□□□ 0.48
ATP2A2P16615 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ATP2A2P16615 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
ATP2A2P16615 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
ATP2A2P16615 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A2P16615 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A2P16615 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A2P16615 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A2P16615 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A2P16615 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A2P16615 HLA-H-201ENST00000383620 1096 ntBASIC18.06■□□□□ 0.48
ATP2A2P16615 MIR1909-201ENST00000411312 80 ntBASIC18.06■□□□□ 0.48
ATP2A2P16615 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
ATP2A2P16615 KRT18P34-201ENST00000488218 1270 ntBASIC18.06■□□□□ 0.48
ATP2A2P16615 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A2P16615 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A2P16615 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.06■□□□□ 0.48
ATP2A2P16615 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.06■□□□□ 0.48
ATP2A2P16615 AL589739.1-201ENST00000607720 493 ntBASIC18.06■□□□□ 0.48
ATP2A2P16615 AC021097.1-201ENST00000607902 574 ntBASIC18.06■□□□□ 0.48
ATP2A2P16615 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.06■□□□□ 0.48
ATP2A2P16615 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A2P16615 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ATP2A2P16615 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A2P16615 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A2P16615 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.06■□□□□ 0.48
ATP2A2P16615 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A2P16615 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A2P16615 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ATP2A2P16615 AC131009.4-201ENST00000624048 1740 ntBASIC18.06■□□□□ 0.48
ATP2A2P16615 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms