Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBCP0CG48 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBCP0CG48 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.41□□□□□ -0.1
UBCP0CG48 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.41□□□□□ -0.1
UBCP0CG48 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBCP0CG48 AC010491.1-201ENST00000563101 2797 ntBASIC14.4□□□□□ -0.1
UBCP0CG48 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.4□□□□□ -0.1
UBCP0CG48 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.4□□□□□ -0.1
UBCP0CG48 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
UBCP0CG48 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBCP0CG48 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.4□□□□□ -0.1
UBCP0CG48 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UBCP0CG48 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.4□□□□□ -0.1
UBCP0CG48 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.4□□□□□ -0.1
UBCP0CG48 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.4□□□□□ -0.1
UBCP0CG48 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.4□□□□□ -0.1
UBCP0CG48 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.4□□□□□ -0.1
UBCP0CG48 AC008667.4-201ENST00000607370 168 ntBASIC14.4□□□□□ -0.1
UBCP0CG48 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.4□□□□□ -0.1
UBCP0CG48 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.4□□□□□ -0.1
UBCP0CG48 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
UBCP0CG48 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.4□□□□□ -0.1
UBCP0CG48 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBCP0CG48 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.4□□□□□ -0.1
UBCP0CG48 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.4□□□□□ -0.1
UBCP0CG48 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.4□□□□□ -0.1
UBCP0CG48 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 FAM45BP-202ENST00000592932 1624 ntBASIC14.4□□□□□ -0.1
UBCP0CG48 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBCP0CG48 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBCP0CG48 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.4□□□□□ -0.1
UBCP0CG48 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 AC144831.1-201ENST00000573312 2656 ntBASIC14.39□□□□□ -0.11
UBCP0CG48 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 AC067930.6-201ENST00000623257 4947 ntBASIC14.39□□□□□ -0.11
UBCP0CG48 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.39□□□□□ -0.11
UBCP0CG48 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.39□□□□□ -0.11
UBCP0CG48 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.39□□□□□ -0.11
UBCP0CG48 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 AC073648.2-201ENST00000510116 352 ntBASIC14.39□□□□□ -0.11
UBCP0CG48 OR7E14P-202ENST00000530490 1290 ntBASIC14.39□□□□□ -0.11
UBCP0CG48 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.39□□□□□ -0.11
UBCP0CG48 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.39□□□□□ -0.11
UBCP0CG48 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.39□□□□□ -0.11
UBCP0CG48 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.39□□□□□ -0.11
UBCP0CG48 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
UBCP0CG48 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
UBCP0CG48 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
UBCP0CG48 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
UBCP0CG48 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms