Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 PMS2P4-201ENST00000412466 1052 ntBASIC17.75■□□□□ 0.43
CCDC172P0C7W6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 OR7E47P-204ENST00000575924 449 ntBASIC17.75■□□□□ 0.43
CCDC172P0C7W6 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 AL773604.1-201ENST00000617417 272 ntBASIC17.75■□□□□ 0.43
CCDC172P0C7W6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CCDC172P0C7W6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 AC132872.4-202ENST00000622924 2756 ntBASIC17.74■□□□□ 0.43
CCDC172P0C7W6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 REXO1L8P-201ENST00000604378 1897 ntBASIC17.74■□□□□ 0.43
CCDC172P0C7W6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 AC093909.1-201ENST00000504731 1122 ntBASIC17.74■□□□□ 0.43
CCDC172P0C7W6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 AL031432.2-201ENST00000566714 459 ntBASIC17.74■□□□□ 0.43
CCDC172P0C7W6 AL928711.1-201ENST00000570165 459 ntBASIC17.74■□□□□ 0.43
CCDC172P0C7W6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 ACTL9-202ENST00000612068 1252 ntBASIC17.74■□□□□ 0.43
CCDC172P0C7W6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CCDC172P0C7W6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 AC092910.1-201ENST00000482027 1129 ntBASIC17.73■□□□□ 0.43
CCDC172P0C7W6 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 MIR4751-201ENST00000578027 74 ntBASIC17.73■□□□□ 0.43
CCDC172P0C7W6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 AL691432.3-201ENST00000621860 400 ntBASIC17.73■□□□□ 0.43
CCDC172P0C7W6 AC117500.6-201ENST00000624871 588 ntBASIC17.73■□□□□ 0.43
CCDC172P0C7W6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CCDC172P0C7W6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms