Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 AC142381.1-201ENST00000426099 345 ntBASIC15.35■□□□□ 0.05
PDGFAP04085 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.35■□□□□ 0.05
PDGFAP04085 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 CR383656.12-201ENST00000549567 513 ntBASIC15.35■□□□□ 0.05
PDGFAP04085 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PDGFAP04085 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.35■□□□□ 0.05
PDGFAP04085 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 TOP3BP1-201ENST00000420768 1380 ntBASIC15.35■□□□□ 0.05
PDGFAP04085 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.35■□□□□ 0.05
PDGFAP04085 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDGFAP04085 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PDGFAP04085 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.34■□□□□ 0.05
PDGFAP04085 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.34■□□□□ 0.05
PDGFAP04085 AC022144.1-201ENST00000602255 1580 ntBASIC15.34■□□□□ 0.05
PDGFAP04085 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.34■□□□□ 0.05
PDGFAP04085 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.34■□□□□ 0.05
PDGFAP04085 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.34■□□□□ 0.05
PDGFAP04085 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.34■□□□□ 0.05
PDGFAP04085 AC120057.1-201ENST00000483947 663 ntBASIC15.34■□□□□ 0.05
PDGFAP04085 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.34■□□□□ 0.05
PDGFAP04085 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.34■□□□□ 0.05
PDGFAP04085 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 MIR3909-201ENST00000579518 119 ntBASIC15.34■□□□□ 0.05
PDGFAP04085 AC091167.2-201ENST00000579581 588 ntBASIC15.34■□□□□ 0.05
PDGFAP04085 AC027307.3-201ENST00000594262 1100 ntBASIC15.34■□□□□ 0.05
PDGFAP04085 AC018529.1-201ENST00000613063 361 ntBASIC15.34■□□□□ 0.05
PDGFAP04085 AC009118.2-201ENST00000613275 655 ntBASIC15.34■□□□□ 0.05
PDGFAP04085 AL138828.2-201ENST00000615812 383 ntBASIC15.34■□□□□ 0.05
PDGFAP04085 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.34■□□□□ 0.05
PDGFAP04085 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PDGFAP04085 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
PDGFAP04085 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.34■□□□□ 0.05
PDGFAP04085 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDGFAP04085 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.34■□□□□ 0.05
PDGFAP04085 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PDGFAP04085 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.33■□□□□ 0.05
PDGFAP04085 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PDGFAP04085 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PDGFAP04085 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PDGFAP04085 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.33■□□□□ 0.05
PDGFAP04085 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PDGFAP04085 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PDGFAP04085 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.33■□□□□ 0.05
PDGFAP04085 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
PDGFAP04085 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.33■□□□□ 0.05
PDGFAP04085 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.33■□□□□ 0.04
PDGFAP04085 OR6D1P-203ENST00000641209 4860 ntBASIC15.33■□□□□ 0.04
PDGFAP04085 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PDGFAP04085 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
PDGFAP04085 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.33■□□□□ 0.04
PDGFAP04085 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PDGFAP04085 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFAP04085 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
PDGFAP04085 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.33■□□□□ 0.04
PDGFAP04085 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PDGFAP04085 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.33■□□□□ 0.04
PDGFAP04085 RARRES2P9-201ENST00000565168 469 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms