Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC009053.2-201ENST00000563701 2365 ntBASIC17.64■□□□□ 0.41
CHRNA1P02708 AL691432.1-201ENST00000596308 1422 ntBASIC17.64■□□□□ 0.41
CHRNA1P02708 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.63■□□□□ 0.41
CHRNA1P02708 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.63■□□□□ 0.41
CHRNA1P02708 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA1P02708 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.63■□□□□ 0.41
CHRNA1P02708 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.63■□□□□ 0.41
CHRNA1P02708 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 RRP7BP-205ENST00000566851 833 ntBASIC17.63■□□□□ 0.41
CHRNA1P02708 TMEM261P1-201ENST00000604899 340 ntBASIC17.63■□□□□ 0.41
CHRNA1P02708 AC017083.2-201ENST00000608069 979 ntBASIC17.63■□□□□ 0.41
CHRNA1P02708 WFDC1-204ENST00000613603 549 ntBASIC17.63■□□□□ 0.41
CHRNA1P02708 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHRNA1P02708 AC090340.1-201ENST00000620778 4980 ntBASIC17.63■□□□□ 0.41
CHRNA1P02708 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.63■□□□□ 0.41
CHRNA1P02708 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHRNA1P02708 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA1P02708 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 Z97205.2-201ENST00000564697 1639 ntBASIC17.62■□□□□ 0.41
CHRNA1P02708 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA1P02708 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 CDC14C-201ENST00000428251 1719 ntBASIC17.62■□□□□ 0.41
CHRNA1P02708 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA1P02708 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA1P02708 HLA-V-201ENST00000429037 534 ntBASIC17.62■□□□□ 0.41
CHRNA1P02708 TTTY23B-201ENST00000442790 549 ntBASIC17.62■□□□□ 0.41
CHRNA1P02708 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA1P02708 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.62■□□□□ 0.41
CHRNA1P02708 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.62■□□□□ 0.41
CHRNA1P02708 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA1P02708 RARRES2P5-201ENST00000564013 466 ntBASIC17.62■□□□□ 0.41
CHRNA1P02708 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA1P02708 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.62■□□□□ 0.41
CHRNA1P02708 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA1P02708 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA1P02708 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
CHRNA1P02708 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHRNA1P02708 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA1P02708 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.62■□□□□ 0.41
CHRNA1P02708 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHRNA1P02708 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHRNA1P02708 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHRNA1P02708 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
CHRNA1P02708 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA1P02708 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA1P02708 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA1P02708 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA1P02708 TMEM14DP-201ENST00000422205 345 ntBASIC17.61■□□□□ 0.41
CHRNA1P02708 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA1P02708 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHRNA1P02708 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.61■□□□□ 0.41
CHRNA1P02708 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.61■□□□□ 0.41
CHRNA1P02708 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA1P02708 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.61■□□□□ 0.41
CHRNA1P02708 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.61■□□□□ 0.41
CHRNA1P02708 LINC01115-203ENST00000606068 577 ntBASIC17.61■□□□□ 0.41
CHRNA1P02708 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms