Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC7.14□□□□□ -1.27
USH2AO75445 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC7.14□□□□□ -1.27
USH2AO75445 AC074338.1-201ENST00000416825 156 ntBASIC7.14□□□□□ -1.27
USH2AO75445 AHRR-211ENST00000515206 462 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC7.14□□□□□ -1.27
USH2AO75445 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC7.14□□□□□ -1.27
USH2AO75445 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 AC009113.1-201ENST00000570267 2443 ntBASIC7.14□□□□□ -1.27
USH2AO75445 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC7.14□□□□□ -1.27
USH2AO75445 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 MIR769-201ENST00000390225 118 ntBASIC7.14□□□□□ -1.27
USH2AO75445 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC7.14□□□□□ -1.27
USH2AO75445 AC098935.1-201ENST00000446057 611 ntBASIC7.14□□□□□ -1.27
USH2AO75445 COX5BP1-201ENST00000507622 393 ntBASIC7.14□□□□□ -1.27
USH2AO75445 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC7.14□□□□□ -1.27
USH2AO75445 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC7.14□□□□□ -1.27
USH2AO75445 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 HYMAI-201ENST00000635591 3347 ntBASIC7.14□□□□□ -1.27
USH2AO75445 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC7.14□□□□□ -1.27
USH2AO75445 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC7.14□□□□□ -1.27
USH2AO75445 SUPT4H1P2-201ENST00000501248 353 ntBASIC7.14□□□□□ -1.27
USH2AO75445 RN7SL713P-201ENST00000582127 302 ntBASIC7.14□□□□□ -1.27
USH2AO75445 AC132192.2-201ENST00000596206 1147 ntBASIC7.14□□□□□ -1.27
USH2AO75445 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 TPR-209ENST00000613151 2478 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC7.14□□□□□ -1.27
USH2AO75445 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC7.14□□□□□ -1.27
USH2AO75445 AC009486.1-201ENST00000569860 813 ntBASIC7.14□□□□□ -1.27
USH2AO75445 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC7.14□□□□□ -1.27
USH2AO75445 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
USH2AO75445 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
USH2AO75445 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
USH2AO75445 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC7.13□□□□□ -1.27
USH2AO75445 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC7.13□□□□□ -1.27
USH2AO75445 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
USH2AO75445 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
USH2AO75445 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
USH2AO75445 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC7.13□□□□□ -1.27
USH2AO75445 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC7.13□□□□□ -1.27
USH2AO75445 AL161670.2-201ENST00000557650 1227 ntBASIC7.13□□□□□ -1.27
USH2AO75445 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC7.13□□□□□ -1.27
USH2AO75445 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
USH2AO75445 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC7.13□□□□□ -1.27
USH2AO75445 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
USH2AO75445 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC7.13□□□□□ -1.27
USH2AO75445 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms