Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRAMEF4O60810 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PRAMEF4O60810 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
PRAMEF4O60810 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 AC142381.1-201ENST00000426099 345 ntBASIC15.7■□□□□ 0.1
PRAMEF4O60810 GPX1P2-201ENST00000429271 606 ntBASIC15.7■□□□□ 0.1
PRAMEF4O60810 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 AC027307.2-201ENST00000591252 911 ntBASIC15.7■□□□□ 0.1
PRAMEF4O60810 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PRAMEF4O60810 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PRAMEF4O60810 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 HTR5BP-201ENST00000430851 1154 ntBASIC15.69■□□□□ 0.1
PRAMEF4O60810 SPCS2P4-201ENST00000436160 681 ntBASIC15.69■□□□□ 0.1
PRAMEF4O60810 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.69■□□□□ 0.1
PRAMEF4O60810 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PRAMEF4O60810 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PRAMEF4O60810 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.68■□□□□ 0.1
PRAMEF4O60810 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms