Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
XRCC2O43543 IL9RP2-201ENST00000423948 1312 ntBASIC14.27□□□□□ -0.12
XRCC2O43543 BCAR1-209ENST00000546196 1340 ntBASIC14.27□□□□□ -0.12
XRCC2O43543 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
XRCC2O43543 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.27□□□□□ -0.13
XRCC2O43543 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.27□□□□□ -0.13
XRCC2O43543 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.27□□□□□ -0.13
XRCC2O43543 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.27□□□□□ -0.13
XRCC2O43543 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.27□□□□□ -0.13
XRCC2O43543 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.27□□□□□ -0.13
XRCC2O43543 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.27□□□□□ -0.13
XRCC2O43543 AC007950.2-201ENST00000615045 2347 ntBASIC14.27□□□□□ -0.13
XRCC2O43543 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.27□□□□□ -0.13
XRCC2O43543 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 U82695.1-201ENST00000635752 1889 ntBASIC14.27□□□□□ -0.13
XRCC2O43543 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.27□□□□□ -0.13
XRCC2O43543 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.27□□□□□ -0.13
XRCC2O43543 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
XRCC2O43543 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.27□□□□□ -0.13
XRCC2O43543 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
XRCC2O43543 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.26□□□□□ -0.13
XRCC2O43543 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.26□□□□□ -0.13
XRCC2O43543 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
XRCC2O43543 AL596087.1-201ENST00000400979 1969 ntBASIC14.26□□□□□ -0.13
XRCC2O43543 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
XRCC2O43543 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 AL590627.1-203ENST00000421194 1026 ntBASIC14.26□□□□□ -0.13
XRCC2O43543 AC140658.5-201ENST00000438532 169 ntBASIC14.26□□□□□ -0.13
XRCC2O43543 KRT18P34-201ENST00000488218 1270 ntBASIC14.26□□□□□ -0.13
XRCC2O43543 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.26□□□□□ -0.13
XRCC2O43543 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.26□□□□□ -0.13
XRCC2O43543 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
XRCC2O43543 AC004877.2-201ENST00000623941 599 ntBASIC14.26□□□□□ -0.13
XRCC2O43543 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.26□□□□□ -0.13
XRCC2O43543 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.26□□□□□ -0.13
XRCC2O43543 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
XRCC2O43543 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
XRCC2O43543 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
XRCC2O43543 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
XRCC2O43543 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.26□□□□□ -0.13
XRCC2O43543 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.26□□□□□ -0.13
XRCC2O43543 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
XRCC2O43543 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.26□□□□□ -0.13
XRCC2O43543 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
XRCC2O43543 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.25□□□□□ -0.13
XRCC2O43543 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
XRCC2O43543 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
XRCC2O43543 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 REXO1L8P-201ENST00000604378 1897 ntBASIC14.25□□□□□ -0.13
XRCC2O43543 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
XRCC2O43543 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.25□□□□□ -0.13
XRCC2O43543 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.25□□□□□ -0.13
XRCC2O43543 AL591424.1-201ENST00000442569 1213 ntBASIC14.25□□□□□ -0.13
XRCC2O43543 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
XRCC2O43543 FDX1P1-201ENST00000449115 551 ntBASIC14.25□□□□□ -0.13
XRCC2O43543 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.25□□□□□ -0.13
XRCC2O43543 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.25□□□□□ -0.13
XRCC2O43543 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms