Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 TFAMP1-201ENST00000412727 736 ntBASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 AL355306.1-201ENST00000415580 579 ntBASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 LINC00571-201ENST00000434565 521 ntTSL 3 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 AC005829.1-201ENST00000570002 483 ntBASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB13Q9Y5F0 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB13Q9Y5F0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB13Q9Y5F0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.14■□□□□ 0.5
PCDHB13Q9Y5F0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PCDHB13Q9Y5F0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
PCDHB13Q9Y5F0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
PCDHB13Q9Y5F0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCDHB13Q9Y5F0 AC018695.7-201ENST00000624587 2492 ntBASIC18.14■□□□□ 0.5
PCDHB13Q9Y5F0 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 AC016180.1-201ENST00000567945 403 ntBASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 MIR3687-2-201ENST00000577708 61 ntBASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 MIR3687-1-201ENST00000614492 61 ntBASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 AL157762.1-201ENST00000619612 415 ntBASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 DOC2GP-204ENST00000639052 2548 ntBASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.14■□□□□ 0.49
PCDHB13Q9Y5F0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 BX842568.4-201ENST00000421222 227 ntBASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.13■□□□□ 0.49
PCDHB13Q9Y5F0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms